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BaseInfo

ncRNA ID	novel_gma_miR2117
Species	Glycine max
Class	miRNA
Genome position	Chr7:32505112-32505306 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451653;SRR1451655;SRR1451657;SRR1451658;SRR1451660;SRR1451662;SRR1451663;SRR1451607
Length	23
Mature sequence(if miRNA)	1 - UUAGAGGUUGCACUAGAACGAUU - 23
Stem-loop(if miRNA)	--        UG        C             C   C          G                     C     A          -            UUAGAGGU  CACUAGAA GAUUAGCACCAAU UGU CUUCUUCCUU UUUACCAGCUCAAUAUCUUUC UUUCA CUUUUGUUUU GUAAAUUACA   ||||||||  |||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||G   AAUCUCCA  GUGAUCUU UUAGUUGUGGUUA GCA GGAGAAGGAG AGAUGGUCGAGUUAUAGAAAG AAAGU GGAAACGAAA CAUUUGAUGU AU        GA        C             A   C          G                     C     -          A
Stem-loop sequence	UUAGAGGUUGCACUAGAACGAUUAGCACCAAUCUGUCCUUCUUCCUUGUUUACCAGCUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUACAGUGUAGUUUACAAAAGCAAAGGUGAAACGAAAGAUAUUGAGCUGGUAGAGGAGGAAGAGGCACGAAUUGGUGUUGAUUCUUCUAGUGAGACCUCUAAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006591670.1	ncRNA:23   UUAGCAAGAUCACGUUGGAGAUU   1   |||=||||||||||||||||||| targets:97   AAUUGUUCUAGUGCAACCUCUAA   119 Target Full Sequence	0.0	PREDICTED: Glycine max glutathione gamma-glutamylcysteinyltransferase 3-like (LOC100778828), mRNA	glutathione gamma-glutamylcysteinyltransferase 3-like(LOC100778828)	coding protein	psRNATarget
XM_006586135.2	ncRNA:23   UUAGCAAGAUCACGUUGGAGAUU   1   =||=||||||||||||||||||| targets:841   GAUUGUUCUAGUGCAACCUCUAA   863 Target Full Sequence	0.0	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_014779469.1	ncRNA:23   UUAGCAAGAUCACGUUGGAGAUU   1   =||=||||||||||||||||||| targets:841   GAUUGUUCUAGUGCAACCUCUAA   863 Target Full Sequence	0.0	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_014764387.1	ncRNA:23   UUAGCAAGAUCACGUUGGAGAUU   1   =|*=||*|||||||||||||||= targets:686   GACUGUGCUAGUGCAACCUCUAG   708 Target Full Sequence	2.0	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 4-like (LOC100812737), mRNA	SNF2 domain-containing protein CLASSY 4-like(LOC100812737)	coding protein	psRNATarget