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BaseInfo

ncRNA ID	novel_gma_miR2114
Species	Glycine max
Class	miRNA
Genome position	Chr8:40985102-40985204 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1294482
Length	24
Mature sequence(if miRNA)	80 - UAGGUGCUUUUGGUAUUGUUCUCC - 103
Stem-loop(if miRNA)	--                  A   C    C GG       -    GUC    U   AGAACAGUAUCAAAAGCA CUA GGAA U  AUCUAAG UUUU   CCUA U   |||||||||||||||||| ||| |||| |  ||||||| ||||   ||||   UCUUGUUAUGGUUUUCGU GAU CCUU A  UAGAUUC GAAA   GGAU U CC                  G   U    C AG       U    --A    U
Stem-loop sequence	AGAACAGUAUCAAAAGCAACUACGGAACUGGAUCUAAGUUUUGUCCCUAUUUUUAGGAAAAGUCUUAGAUGAACUUCCUUAGGUGCUUUUGGUAUUGUUCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006594101.2	ncRNA:24   CCUCUUGUUAUGGUUUUCGUGGAU   1   ||||||||||||=||||||||||| targets:263   GGAGAACAAUACUAAAAGCACCUA   286 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100810255 (LOC100810255), transcript variant X7, mRNA	uncharacterized LOC100810255(LOC100810255)	coding protein	psRNATarget
XM_006594099.2	ncRNA:24   CCUCUUGUUAUGGUUUUCGUGGAU   1   ||||||||||||=||||||||||| targets:345   GGAGAACAAUACUAAAAGCACCUA   368 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100810255 (LOC100810255), transcript variant X9, mRNA	uncharacterized LOC100810255(LOC100810255)	coding protein	psRNATarget
XM_006594098.2	ncRNA:24   CCUCUUGUUAUGGUUUUCGUGGAU   1   ||||||||||||=||||||||||| targets:423   GGAGAACAAUACUAAAAGCACCUA   446 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100810255 (LOC100810255), transcript variant X6, mRNA	uncharacterized LOC100810255(LOC100810255)	coding protein	psRNATarget
XM_014765532.1	ncRNA:24   CCUCUUGUUAUGGUUUUCGUGGAU   1   ||||||||||||=||||||||||| targets:445   GGAGAACAAUACUAAAAGCACCUA   468 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100810255 (LOC100810255), transcript variant X5, mRNA	uncharacterized LOC100810255(LOC100810255)	coding protein	psRNATarget
KM397557.1	ncRNA:24   CCUC-UUGUUAUGGUUUUCGUGGAU   1   |*||-=|||*|||||||||||=||| targets:235   GCAGCGACAUUACCAAAAGCAUCUA   259 Target Full Sequence	2.5	Glycine max MLH1 mRNA, partial cds	NA	coding protein	psRNATarget
XM_003522549.3	ncRNA:24   CCUC-UUGUUAUGGUUUUCGUGGAU   1   |*||-=|||*|||||||||||=||| targets:980   GCAGCGACAUUACCAAAAGCAUCUA   1004 Target Full Sequence	2.5	PREDICTED: Glycine max DNA mismatch repair protein MLH1 (LOC100794788), mRNA	DNA mismatch repair protein MLH1(LOC100794788)	coding protein	psRNATarget