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BaseInfo

ncRNA ID novel_gma_miR2113
Species Glycine max
Class miRNA
Genome position Chr7:6843238-6843313 [-]
Reference genome Glycine_max_v2.0
Source SRR1451653
Length 22
Mature sequence(if miRNA) 1 - UUUCCGGAAUCACUUUAGAAUG - 22
Stem-loop(if miRNA) --     U   -      AU         A     AAAA
  UUUUA GAG GAUUUU  GAAAAUCAU UUAAA    U
  ||||| ||| ||||||  ||||||||| |||||
  AAGAU UUC CUAAGG  UUUUUAGUA AAUUU    A
GU     -   A      CC         A     AACU
Stem-loop sequence UUUUAUGAGGAUUUUAUGAAAAUCAUAUUAAAAAAAUAUCAAUUUAAAAUGAUUUUUCCGGAAUCACUUUAGAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006587531.2
ncRNA:22   GUAAGAUUUCACUAAGGCCUUU   1
  ***|||||||||||||*||||=
targets:758   GUCUCUAAAGUGAUUCAGGAAG   779

2.5 PREDICTED: Glycine max uncharacterized LOC100790691 (LOC100790691), transcript variant X2, mRNA uncharacterized LOC100790691(LOC100790691) coding protein psRNATarget