Search result

BaseInfo

ncRNA ID	novel_gma_miR2108
Species	Glycine max
Class	miRNA
Genome position	Chr6:21095756-21095845 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451653;SRR1451655;SRR1451660;SRR1451609
Length	24
Mature sequence(if miRNA)	67 - AAUCAUAAUUUGUAUUGAAUUGGA - 90
Stem-loop(if miRNA)	--                                  A   ACU   U   CAAUUCAAUACAAAUUAUGAUUCACUAUUCAAAA UUA   UGG G   |||||||||||||||||||||||||||||||||| |||   |||   GUUAAGUUAUGUUUAAUACUAAGUGAUAAGUUUU AGU   ACU A AG                                  -   ---   U
Stem-loop sequence	CAAUUCAAUACAAAUUAUGAUUCACUAUUCAAAAAUUAACUUGGUGAUUCAUGAUUUUGAAUAGUGAAUCAUAAUUUGUAUUGAAUUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014765845.1	ncRNA:24   AGGUUAAGUUAUGUUUAAUACUAA   1   |*||||||=|||||||||=||||| targets:3474   UACAAUUCGAUACAAAUUGUGAUU   3497 Target Full Sequence	2.5	PREDICTED: Glycine max receptor-like serine/threonine-protein kinase SD1-7 (LOC100802956), mRNA	receptor-like serine/threonine-protein kinase SD1-7(LOC100802956)	coding protein	psRNATarget
XM_003530828.3	ncRNA:24   AGGU--UAAGUUAUGUUUAAUACUAA   1   ||||--|*||||*||||||||||||* targets:2469   UCCAGCAAUCAAAACAAAUUAUGAUG   2494 Target Full Sequence	3.0	PREDICTED: Glycine max putative receptor protein kinase ZmPK1 (LOC100785351), mRNA	putative receptor protein kinase ZmPK1(LOC100785351)	coding protein	psRNATarget