ncRNA ID | novel_gma_miR2100 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:17804803-17804889 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294482;SRR1295517;SRR1295525;SRR1295531;SRR1451615;SRR1451618 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUGAGAUUUUGAGGUUUAGAAAGC - 24 |
Stem-loop(if miRNA) |
--G   G        GU      --   -  AA      G    UG    UGA AUUUUGAG  UUAGAA  AGC CA  UUUGGG UUAG  G    ||| ||||||||  ||||||  ||| ||  |||||| ||||  A    AUU UAAGAUUU  GAUCUU  UUG GU  AAAUUU AGUU  A UUA   G        --      AG   A  -G      G    UA |
Stem-loop sequence | GUGAGAUUUUGAGGUUUAGAAAGCCAAAUUUGGGGUUAGUGGAAAUUUGAGUUUAAAGUGAGUUGAUUCUAGUUUAGAAUGUUAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006589122.2 |
|
3.0 | PREDICTED: Glycine max PRA1 family protein E-like (LOC100790708), mRNA | PRA1 family protein E-like(LOC100790708) | coding protein | psRNATarget |