ncRNA ID | novel_gma_miR2099 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:20415675-20415723 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451653;SRR1451654;SRR1451662;SRR1451663;SRR1451618 |
Length | 21 |
Mature sequence(if miRNA) | 29 - UUCUUAAUUAUUCUGAGGCCU - 49 |
Stem-loop(if miRNA) |
--    A           UUCAAC   GUUU GGAAUAAUUAA      C   |||| |||||||||||      C   CGGA UCUUAUUAAUU      C UC    G           CUUCCC |
Stem-loop sequence | GUUUAGGAAUAAUUAAUUCAACCCCCCCUUCUUAAUUAUUCUGAGGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014776666.1 |
|
2.5 | PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 17 (LOC100810967), transcript variant X2, mRNA | probable cyclic nucleotide-gated ion channel 17(LOC100810967) | coding protein | psRNATarget | |||||||||
XM_006582039.2 |
|
2.5 | PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 17 (LOC100810967), transcript variant X1, mRNA | probable cyclic nucleotide-gated ion channel 17(LOC100810967) | coding protein | psRNATarget |