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BaseInfo

ncRNA ID novel_gma_miR2090
Species Glycine max
Class miRNA
Genome position Chr5:26211633-26211707 [-]
Reference genome Glycine_max_v2.0
Source SRR1451653
Length 21
Mature sequence(if miRNA) 1 - UUUUAAAAAACCGAUGUAACC - 21
Stem-loop(if miRNA) -UUA          --                    AG
    ACAUCGGUUU  UGAGAAAACCGAUGUUAAGG  U
    ||||||||||  ||||||||||||||||||||
    UGUAGCCAAA  AUUUUUUUGGUUACAAUUCU  U
CCAA          AA                    AG
Stem-loop sequence UUAACAUCGGUUUUGAGAAAACCGAUGUUAAGGAGUUGAUCUUAACAUUGGUUUUUUUAAAAAACCGAUGUAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242673.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-||||||||||||||||
targets:18   AUUUAACAUCGGUUUUUUAAAA   39

2.0 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-||||||||||||||||
targets:119   AUUUAACAUCGGUUUUUUAAAA   140

2.0 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
HI410543.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-||||||||||||||||
targets:18   AUUUAACAUCGGUUUUUUAAAA   39

2.0 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-||||||||||||||||
targets:119   AUUUAACAUCGGUUUUUUAAAA   140

2.0 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
JB171004.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-||||||||||||||||
targets:18   AUUUAACAUCGGUUUUUUAAAA   39

2.0 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-||||||||||||||||
targets:119   AUUUAACAUCGGUUUUUUAAAA   140

2.0 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
BT093149.1
ncRNA:21   CCAAUGUAGCCAAAAAAUUUU   1
  **|||*||||||||||||*||
targets:486   UCUUAAAUCGGUUUUUUAUAA   506

2.5 Soybean clone JCVI-FLGm-22N9 unknown mRNA NA coding protein psRNATarget
LQ242673.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-|||||||||||||||*
targets:59   AUUUAACAUCGGUUUUUUAAAU   80

3.0 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-|||||||||||||||*
targets:160   AUUUAACAUCGGUUUUUUAAAU   181

3.0 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
HI410543.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-|||||||||||||||*
targets:59   AUUUAACAUCGGUUUUUUAAAU   80

3.0 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-|||||||||||||||*
targets:160   AUUUAACAUCGGUUUUUUAAAU   181

3.0 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
JB171004.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-|||||||||||||||*
targets:59   AUUUAACAUCGGUUUUUUAAAU   80

3.0 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-|||||||||||||||*
targets:160   AUUUAACAUCGGUUUUUUAAAU   181

3.0 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget