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BaseInfo

ncRNA ID novel_gma_miR2086
Species Glycine max
Class miRNA
Genome position Chr4:3341214-3341255 [-]
Reference genome Glycine_max_v2.0
Source SRR1451653;SRR1451654;SRR1451663
Length 21
Mature sequence(if miRNA) 22 - UUUUAAGACUUACGGAUCAAU - 42
Stem-loop(if miRNA) -UUUUAAGA          A
         CUUACGGAUC A
         |||||||||| U
         GAGUGUCUAG U
UAAAAAGAG          U
Stem-loop sequence UUUUAAGACUUACGGAUCAAUUUGAUCUGUGAGGAGAAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:21   UAACUAGGCAUUCAGAAUUUU   1
  *||||||||||||||||||||
targets:467   CUUGAUCCGUAAGUCUUAAAA   487

0.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:21   UAACUAGGCAUUCAGAAUUUU   1
  *||||||||||||||||||||
targets:1062   CUUGAUCCGUAAGUCUUAAAA   1082

0.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget