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BaseInfo

ncRNA ID novel_gma_miR2085
Species Glycine max
Class miRNA
Genome position Chr4:14183222-14183313 [-]
Reference genome Glycine_max_v2.0
Source SRR1451653
Length 21
Mature sequence(if miRNA) 1 - CAAAUAACCGUCUUAGAAAGU - 21
Stem-loop(if miRNA) --AA                     A  A      A     ACUCU
    UCUAAGACGGUUAUUUGGAUA CC UCUUAG AUGUC     U
    ||||||||||||||||||||| || |||||| |||||
    AGAUUCUGCCAAUAAACCUAU GG AGAAUC UACGG     U
UGAA                     C  C      A     AUUAU
Stem-loop sequence AAUCUAAGACGGUUAUUUGGAUAACCAUCUUAGAAUGUCACUCUUUUAUUAGGCAUACUAAGACGGCUAUCCAAAUAACCGUCUUAGAAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773514.1
ncRNA:21   UGAAAGAUUCUGCCAAUAAAC   1
  ||*||||||||||||||||||
targets:268   ACAUUCUAAGACGGUUAUUUG   288

1.0 PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA uncharacterized LOC106798042(LOC106798042) coding protein psRNATarget
XM_014771087.1
ncRNA:21   UGAAAGAUUCUGCCAAUAAAC   1
  ||*|||||||||||||*||||
targets:2513   ACAUUCUAAGACGGUUCUUUG   2533

2.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget