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BaseInfo

ncRNA ID	novel_gma_miR2070
Species	Glycine max
Class	miRNA
Genome position	Chr9:47816975-47817150 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451652
Length	23
Mature sequence(if miRNA)	154 - AAGAACUAAAACAAAAAAAAAUU - 176
Stem-loop(if miRNA)	--                                            UAU    AAU           -  GCG    G G  -A     A   UUUUUUUUUGUUUUAGUUCUUGUAAAAUGUUUGUUUUAUUUUUU   UCUU   AGUGUUUUAGA CA   UUUU A UA  UAAAA A   ||||||||||||||||||||||||||||||||||||||||||||   ||||   ||||||||||| ||   |||| | ||  |||||   AAAAAAAAACAAAAUCAAGAACAUUUUACAAACAAAAUAAAAAA   AGAA   UCACAAAAUCU GU   AAAA U AU  GUUUU U UU                                            --U    AUU           A  AAA    G G  AA     G
Stem-loop sequence	UUUUUUUUUGUUUUAGUUCUUGUAAAAUGUUUGUUUUAUUUUUUUAUUCUUAAUAGUGUUUUAGACAGCGUUUUGAGUAAUAAAAAAUGUUUUGAAUAGUGAAAAAAAUGAUCUAAAACACUUUAAAGAUAAAAAAUAAAACAAACAUUUUACAAGAACUAAAACAAAAAAAAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT094695.1	ncRNA:23   UUAAAAAAAAACAAAAUCAAGAA   1   **|||||||||*||||||||||| targets:3   UUUUUUUUUUUUUUUUAGUUCUU   25 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-6A17 unknown mRNA	NA	coding protein	psRNATarget
XM_006594548.2	ncRNA:23   UUAAAAAAAAACAAAAUCAAGAA   1   **||||||||||||||=|||||* targets:286   UUUUUUUUUUUGUUUUGGUUCUG   308 Target Full Sequence	2.5	PREDICTED: Glycine max protein STRUBBELIG-RECEPTOR FAMILY 3-like (LOC100793423), mRNA	protein STRUBBELIG-RECEPTOR FAMILY 3-like(LOC100793423)	coding protein	psRNATarget
XM_003547355.3	ncRNA:23   UUAAAAAAAAACAAAAUCAAGAA   1   *=||*|||||||||||||||=|| targets:280   CGUUAUUUUUUGUUUUAGUUUUU   302 Target Full Sequence	2.5	PREDICTED: Glycine max general transcriptional corepressor trfA-like (LOC100796627), mRNA	general transcriptional corepressor trfA-like(LOC100796627)	coding protein	psRNATarget
AK244108.1	ncRNA:23   UUAAAAA-AAAACAAAAUCAAGAA   1   ||||*||-|||||||||||||||| targets:508   AAUUGUUGUUUUGUUUUAGUUCUU   531 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-02-B21	NA	coding protein	psRNATarget
AK243697.1	ncRNA:23   UUAAAAA-AAAACAAAAUCAAGAA   1   ||||*||-|||||||||||||||| targets:508   AAUUGUUGUUUUGUUUUAGUUCUU   531 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-01-A05	NA	coding protein	psRNATarget
BT089438.1	ncRNA:23   UUAAAAA-AAAACAAAAUCAAGAA   1   ||||*||-|||||||||||||||| targets:509   AAUUGUUGUUUUGUUUUAGUUCUU   532 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-1P20 unknown mRNA	NA	coding protein	psRNATarget
NM_001248169.2	ncRNA:23   UUAAAAA-AAAACAAAAUCAAGAA   1   ||||*||-|||||||||||||||| targets:507   AAUUGUUGUUUUGUUUUAGUUCUU   530 Target Full Sequence	3.0	Glycine max proline-rich protein (SBPRP), mRNA	proline-rich protein(SBPRP)	coding protein	psRNATarget
AK243751.1	ncRNA:23   UUAAAAA-AAAACAAAAUCAAGAA   1   ||||*||-|||||||||||||||| targets:506   AAUUGUUGUUUUGUUUUAGUUCUU   529 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-01-C14	NA	coding protein	psRNATarget
AF248055.1	ncRNA:23   UUAAAAA-AAAACAAAAUCAAGAA   1   ||||*||-|||||||||||||||| targets:475   AAUUGUUGUUUUGUUUUAGUUCUU   498 Target Full Sequence	3.0	Glycine max proline-rich protein mRNA, complete cds	NA	coding protein	psRNATarget