Search result

BaseInfo

ncRNA ID	novel_gma_miR2064
Species	Glycine max
Class	miRNA
Genome position	Chr8:41900469-41900639 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451652;SRR1451653;SRR1451654;SRR1451655;SRR1451658;SRR1451664
Length	20
Mature sequence(if miRNA)	1 - UUAGUCUUCAAACUUCAACU - 20
Stem-loop(if miRNA)	--      U   A    C     CG  A        UU          -----CU         A      A  A    -     --  G   UUAGUC UCA ACUU AACUU  AU AAUUUGGU  CUGAACUUUA       AAAAACAAU AUUUCC UC CUUC UCAUA  GU A   |||||| ||| |||| |||||  || ||||||||  ||||||||||       ||||||||| |||||| || |||| |||||  ||   AAUCAG AGU UGAA UUGAA  UA UUAAACUA  GAUUUGAAGU       UUUUUGUUA UAAAGG AG GGAG AGUGU  CA A AU      U   A    A     AU  G        GG          UUUUUUU         C      C  -    U     AC  A
Stem-loop sequence	UUAGUCUUCAAACUUCAACUUCGAUAAAUUUGGUUUCUGAACUUUACUAAAAACAAUAAUUUCCAUCACUUCUCAUAGUGAAAACCAUGUGAUGAGGGACGGAAAUCAUUGUUUUUUUUUUUUUGAAGUUUAGGGAUCAAAUUGAUUAAAGUUAAAGUAUGAUGACUAAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003525840.3	ncRNA:20   UCAACUUCAAACUUCUGAUU   1   |*|||||||||||||||*|| targets:544   ACUUGAAGUUUGAAGACAAA   563 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100800115 (LOC100800115), transcript variant X1, mRNA	uncharacterized LOC100800115(LOC100800115)	coding protein	psRNATarget