ncRNA ID | novel_gma_miR2063 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:40985098-40985208 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451652 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUGGAGAACAGUAUCAAAAGC - 21 |
Stem-loop(if miRNA) |
--C                     A   C    C GG       -    GUC    U    UGGAGAACAGUAUCAAAAGCA CUA GGAA U  AUCUAAG UUUU   CCUA U    ||||||||||||||||||||| ||| |||| |  ||||||| ||||   ||||    ACCUCUUGUUAUGGUUUUCGU GAU CCUU A  UAGAUUC GAAA   GGAU U CUA                     G   U    C AG       U    --A    U |
Stem-loop sequence | CUGGAGAACAGUAUCAAAAGCAACUACGGAACUGGAUCUAAGUUUUGUCCCUAUUUUUAGGAAAAGUCUUAGAUGAACUUCCUUAGGUGCUUUUGGUAUUGUUCUCCAAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006604676.2 |
|
2.5 | PREDICTED: Glycine max DNA mismatch repair protein MSH6 (LOC100811104), mRNA | DNA mismatch repair protein MSH6(LOC100811104) | coding protein | psRNATarget |