Search result

BaseInfo

ncRNA ID novel_gma_miR2060
Species Glycine max
Class miRNA
Genome position Chr7:25593746-25593816 [+]
Reference genome Glycine_max_v2.0
Source SRR1451652
Length 22
Mature sequence(if miRNA) 50 - UCAAGUUGAUCCGUAAAAGGCU - 71
Stem-loop(if miRNA) --               A              GAU
  CCUUUUACGGAUCAA UUGAUUCGUAUGUU   A
  ||||||||||||||| ||||||||||||||   U
  GGAAAAUGCCUAGUU AACUAAGCAUACGA   U
UC               G              AUU
Stem-loop sequence CCUUUUACGGAUCAAAUUGAUUCGUAUGUUGAUAUUUUAAGCAUACGAAUCAAGUUGAUCCGUAAAAGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003543974.3
ncRNA:22   UCGGAA-AAUGCCUAGUUGAACU   1
  =*=|||-||*|||||||||||||
targets:1073   GAUCUUAUUCCGGAUCAACUUGA   1095

3.0 PREDICTED: Glycine max alpha/beta hydrolase domain-containing protein 17B-like (LOC100798903), mRNA alpha/beta hydrolase domain-containing protein 17B-like(LOC100798903) coding protein psRNATarget