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BaseInfo

ncRNA ID novel_gma_miR2058
Species Glycine max
Class miRNA
Genome position Chr11:19082005-19082058 [+]
Reference genome Glycine_max_v2.0
Source SRR1451652
Length 24
Mature sequence(if miRNA) 1 - AAUAGAAUGUGAACAUGAACAUGU - 24
Stem-loop(if miRNA) --       U       -   -     U
  AAUAGAA GUGAACA UGA ACAUG A
  ||||||| ||||||| ||| ||||| C
  UUAUCUU CAUUUGU ACU UGUAU A
UU       -       U   A     U
Stem-loop sequence AAUAGAAUGUGAACAUGAACAUGUACAUUAUGUAUCAUUGUUUACUUCUAUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001249786.1
ncRNA:24   UGUACAAGUACAAGUGUAAGAUAA   1
  *||-||||||||||||*|||||||
targets:693   CCA-GUUCAUGUUCACCUUCUAUU   715

1.5 Glycine max uncharacterized LOC100500606 (LOC100500606), mRNA uncharacterized LOC100500606(LOC100500606) coding protein psRNATarget
BT091546.1
ncRNA:24   UGUACAAGUACAAGUGUAAGAUAA   1
  *||-||||||||||||*|||||||
targets:693   CCA-GUUCAUGUUCACCUUCUAUU   715

1.5 Soybean clone JCVI-FLGm-8A22 unknown mRNA NA coding protein psRNATarget