Search result

BaseInfo

ncRNA ID novel_gma_miR2055
Species Glycine max
Class miRNA
Genome position Chr7:11228165-11228255 [-]
Reference genome Glycine_max_v2.0
Source SRR1451652;SRR1451606
Length 24
Mature sequence(if miRNA) 1 - UUGACAUAUAGUCCUGAUCAGCCU - 24
Stem-loop(if miRNA) -GCAA       U  A U    ACCAUGGCAUACAUGAGACUGCCA
     GGUCAGG CU G GCAG                        A
     ||||||| || | ||||
     CUAGUCC GA U AUAC                        C
UCCGA       U  - -    AGUUUCCAAGGUAUGAAUUCACAA
Stem-loop sequence GCAAGGUCAGGUCUAGUGCAGACCAUGGCAUACAUGAGACUGCCAACAACACUUAAGUAUGGAACCUUUGACAUAUAGUCCUGAUCAGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003534980.3
ncRNA:24   UCCGACUAGUCCUGAUAUACAGUU   1
  ***=||=||*|||||||||||||*
targets:1996   UUUUUGGUCUGGACUAUAUGUCAU   2019

3.0 PREDICTED: Glycine max ferric reduction oxidase 7, chloroplastic-like (LOC100804994), mRNA ferric reduction oxidase 7, chloroplastic-like(LOC100804994) coding protein psRNATarget