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BaseInfo

ncRNA ID novel_gma_miR2053
Species Glycine max
Class miRNA
Genome position Chr6:46275045-46275133 [+]
Reference genome Glycine_max_v2.0
Source SRR1451652
Length 22
Mature sequence(if miRNA) 1 - UUUCUAGUUGUUCUCUGAAUGC - 22
Stem-loop(if miRNA) --    UA    U       A     -  UUAAUU  C  GG  U
  UUUC  GUUG UCUCUGA UGCAU AC      GU GG  AA U
  ||||  |||| ||||||| ||||| ||      || ||  || A
  AAAG  UAAC AGAGAUU AUGUG UG      CA CC  UU A
GU    UG    U       C     C  UACUUU  -  AU  U
Stem-loop sequence UUUCUAGUUGUUCUCUGAAUGCAUACUUAAUUGUCGGGGAAUUAAUUUUACCACUUUCAUGUCGUGUACUUAGAGAUCAAUGUGAAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003554519.3
ncRNA:22   CGUAAGUCUCUUGUUGAUCUUU   1
  *|||||=|=||||||||||||*
targets:654   UCAUUCGGGGAACAACUAGAAC   675

3.0 PREDICTED: Glycine max boron transporter 1-like (LOC100776705), mRNA boron transporter 1-like(LOC100776705) coding protein psRNATarget