ncRNA ID | novel_gma_miR2053 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:46275045-46275133 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451652 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUUCUAGUUGUUCUCUGAAUGC - 22 |
Stem-loop(if miRNA) |
--    UA    U       A     -  UUAAUU  C  GG  U   UUUC  GUUG UCUCUGA UGCAU AC      GU GG  AA U   ||||  |||| ||||||| ||||| ||      || ||  || A   AAAG  UAAC AGAGAUU AUGUG UG      CA CC  UU A GU    UG    U       C     C  UACUUU  -  AU  U |
Stem-loop sequence | UUUCUAGUUGUUCUCUGAAUGCAUACUUAAUUGUCGGGGAAUUAAUUUUACCACUUUCAUGUCGUGUACUUAGAGAUCAAUGUGAAAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003554519.3 |
|
3.0 | PREDICTED: Glycine max boron transporter 1-like (LOC100776705), mRNA | boron transporter 1-like(LOC100776705) | coding protein | psRNATarget |