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BaseInfo

ncRNA ID novel_gma_miR2050
Species Glycine max
Class miRNA
Genome position Chr6:19354752-19354815 [-]
Reference genome Glycine_max_v2.0
Source SRR1451652;SRR1451653;SRR1451607
Length 22
Mature sequence(if miRNA) 43 - CUUACGGAUCAACUUGAUUAGU - 64
Stem-loop(if miRNA) --C                        UUUCU
   UUACGGAUCAACUUGAUUAGUAAG     U
   ||||||||||||||||||||||||
   AAUGCCUAGUUGAACUAGUCAUUC     C
UUC                        UACAA
Stem-loop sequence CUUACGGAUCAACUUGAUUAGUAAGUUUCUUCAACAUCUUACUGAUCAAGUUGAUCCGUAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524153.3
ncRNA:22   UGAUUAGUUCAACUAGGCAUUC   1
  ||*=|||||||||||||||||*
targets:235   ACGGAUCAAGUUGAUCCGUAAA   256

2.0 PREDICTED: Glycine max uncharacterized LOC100805437 (LOC100805437), mRNA uncharacterized LOC100805437(LOC100805437) coding protein psRNATarget
XM_006600975.2
ncRNA:22   UGAUUAGUUCAACUAGGCAUUC   1
  ||*=|||||*||||||||||||
targets:1253   ACGGAUCAACUUGAUCCGUAAG   1274

2.5 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget