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BaseInfo

ncRNA ID	novel_gma_miR2043
Species	Glycine max
Class	miRNA
Genome position	Chr1:48858750-48858864 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451652;SRR1451658
Length	24
Mature sequence(if miRNA)	1 - AACUUGAUCCGUAUGACUCAUACG - 24
Stem-loop(if miRNA)	--             A    ACU    - -    GAUAUUUUCGCUCAUUCUCUUAAAA   UAUGAGUCAUACG AUCA   UGAG U AAAG                         U   ||||||||||||| ||||   |||| | ||||                         G   AUACUCAGUAUGC UAGU   CAAC C ACGU                         U GC             C    --U    U C    GGGUAUUAAUAACGACCACGUAGGU
Stem-loop sequence	UAUGAGUCAUACGAAUCAACUUGAGUAAAGGAUAUUUUCGCUCAUUCUCUUAAAAUGUUGGAUGCACCAGCAAUAAUUAUGGGUGCACCUCAACUUGAUCCGUAUGACUCAUACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006573065.2	ncRNA:24   GCAUACUCAGUAUGCCUAGUUCAA   1   |||||||*||||||||||*||||| targets:3919   CGUAUGACUCAUACGGAUGAAGUU   3942 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X2, mRNA	uncharacterized LOC102666756(LOC102666756)	coding protein	psRNATarget
XM_014773439.1	ncRNA:24   GCAUACUCAGUAUGCCUAGUUCAA   1   |||||||*||||||||||*||||| targets:3919   CGUAUGACUCAUACGGAUGAAGUU   3942 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X3, mRNA	uncharacterized LOC102666756(LOC102666756)	coding protein	psRNATarget
XM_014773434.1	ncRNA:24   GCAUACUCAGUAUGCCUAGUUCAA   1   |||||||*||||||||||*||||| targets:3919   CGUAUGACUCAUACGGAUGAAGUU   3942 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X1, mRNA	uncharacterized LOC102666756(LOC102666756)	coding protein	psRNATarget
XM_006593444.2	ncRNA:24   GCAUACUCAGUAUGCCUAGUUCAA   1   =||||*|**||||||||||||||| targets:3666   UGUAUAAAGCAUACGGAUCAAGUU   3689 Target Full Sequence	3.0	PREDICTED: Glycine max calcium-transporting ATPase 8, plasma membrane-type-like (LOC100813841), transcript variant X11, mRNA	calcium-transporting ATPase 8, plasma membrane-type-like(LOC100813841)	coding protein	psRNATarget