ncRNA ID | novel_gma_miR2042 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:23918269-23918483 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451652 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGUAAUAACCGUCUUUGAAUGUU - 24 |
Stem-loop(if miRNA) |
--       AAC               -    U  UUU                                       UGCU   UCU  UU  A              C   A   AUGUAAU   CGUCUUUGAAUGUUG UGUA AC   GAUAUUCAAAGACGGUUAUUAUCUAAUAAUCGUCUUUGA    GCA   GC  GG CAUUCAAAGACGGU AUU G   |||||||   ||||||||||||||| |||| ||   |||||||||||||||||||||||||||||||||||||||    |||   ||  || |||||||||||||| |||   UACAUUA   GCAGAAACUUACAGC ACGU UG   UUGUAAGUUUCUGCCAAUAAUAGAUUAUUGGCAGAAACU    UGU   CG  UC GUAAGUUUCUGCUA UAA A AA       CUA               U    C  -CG                                       ----   --U  --  -              A   U |
Stem-loop sequence | AUGUAAUAACCGUCUUUGAAUGUUGUGUAUACUUUGAUAUUCAAAGACGGUUAUUAUCUAAUAAUCGUCUUUGAUGCUGCAUCUGCUUGGACAUUCAAAGACGGUCAUUAGAUAAUAAUCGUCUUUGAAUGCUGCUUGUUCAAAGACGGUUAUUAGAUAAUAACCGUCUUUGAAUGUUGCGUCUGCAUCGACAUUCAAAGACGAUCAUUACAUAA |