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BaseInfo

ncRNA ID novel_gma_miR2039
Species Glycine max
Class miRNA
Genome position Chr4:8497423-8497531 [-]
Reference genome Glycine_max_v2.0
Source SRR1451652
Length 24
Mature sequence(if miRNA) 1 - AUCAAAAUUAAUUGUAAUAAGACC - 24
Stem-loop(if miRNA) --      G               C                           AU
  UUUUGU ACAAUUAAUUUUGAU UAAUAAUUAAUUUUUUUACAUAUAUAA  U
  |||||| ||||||||||||||| |||||||||||||||||||||||||||  U
  AGAAUA UGUUAAUUAAAACUA AUUAUUAAUUAAAAAAAUGUAUAUAUU  U
CC      A               A                           AU
Stem-loop sequence UUUUGUGACAAUUAAUUUUGAUCUAAUAAUUAAUUUUUUUACAUAUAUAAAUUUUUAUUAUAUAUGUAAAAAAAUUAAUUAUUAAAUCAAAAUUAAUUGUAAUAAGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT094110.1
ncRNA:24   CCAGAAUA-AUGUUAAUUAAAACUA   1
  *||*||||-||*|||||||||||||
targets:1055   UGUGUUAUGUAAAAUUAAUUUUGAU   1079

3.0 Soybean clone JCVI-FLGm-14O16 unknown mRNA NA coding protein psRNATarget
XM_003541656.3
ncRNA:24   CCAGAAUA-AUGUUAAUUAAAACUA   1
  *||*||||-||*|||||||||||||
targets:1347   UGUGUUAUGUAAAAUUAAUUUUGAU   1371

3.0 PREDICTED: Glycine max protein trichome birefringence-like 19 (LOC100812752), mRNA protein trichome birefringence-like 19(LOC100812752) coding protein psRNATarget