ncRNA ID | novel_gma_miR2039 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:8497423-8497531 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451652 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCAAAAUUAAUUGUAAUAAGACC - 24 |
Stem-loop(if miRNA) |
--      G               C                           AU   UUUUGU ACAAUUAAUUUUGAU UAAUAAUUAAUUUUUUUACAUAUAUAA  U   |||||| ||||||||||||||| |||||||||||||||||||||||||||  U   AGAAUA UGUUAAUUAAAACUA AUUAUUAAUUAAAAAAAUGUAUAUAUU  U CC      A               A                           AU |
Stem-loop sequence | UUUUGUGACAAUUAAUUUUGAUCUAAUAAUUAAUUUUUUUACAUAUAUAAAUUUUUAUUAUAUAUGUAAAAAAAUUAAUUAUUAAAUCAAAAUUAAUUGUAAUAAGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT094110.1 |
|
3.0 | Soybean clone JCVI-FLGm-14O16 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_003541656.3 |
|
3.0 | PREDICTED: Glycine max protein trichome birefringence-like 19 (LOC100812752), mRNA | protein trichome birefringence-like 19(LOC100812752) | coding protein | psRNATarget |