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BaseInfo

ncRNA ID novel_gma_miR2033
Species Glycine max
Class miRNA
Genome position Chr3:25633983-25634160 [-]
Reference genome Glycine_max_v2.0
Source SRR1451652
Length 22
Mature sequence(if miRNA) 1 - UUUUAAAAAACUGAUGUUAACU - 22
Stem-loop(if miRNA) --                                CU  A  AC            UUAAA             ACCUGA         C UC
  UUAAUAUCGGUUUUUUAAAACCCGAUGUUAAC  UA GU  UUAACAUCGGUU     AUAACCGAUGUUA      AGUACUUAA A  A
  ||||||||||||||||||||||||||||||||  || ||  ||||||||||||     |||||||||||||      ||||||||| |
  AAUUGUAGUCAAAAAAUUUUGGGCUACAAUUG  AU UA  AAUUGUAGCCAA     UGUUGGCUACAAU      UCAUGAAUU U  A
UC                                AU  A  CC            UAAAA             ------         U UU
Stem-loop sequence UUAAUAUCGGUUUUUUAAAACCCGAUGUUAACCUUAAGUACUUAACAUCGGUUUUAAAAUAACCGAUGUUAACCUGAAGUACUUAACAUCAAUUUUUUAAGUACUUAACAUCGGUUGUAAAAUAACCGAUGUUAACCAUAUAUAGUUAACAUCGGGUUUUAAAAAACUGAUGUUAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242673.1
ncRNA:22   UCAAUUGUAGUCAAAAAAUUUU   1
  |*||||||||=|||||||||||
targets:18   AUUUAACAUCGGUUUUUUAAAA   39

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:22   UCAAUUGUAGUCAAAAAAUUUU   1
  |*||||||||=|||||||||||
targets:119   AUUUAACAUCGGUUUUUUAAAA   140

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
HI410543.1
ncRNA:22   UCAAUUGUAGUCAAAAAAUUUU   1
  |*||||||||=|||||||||||
targets:18   AUUUAACAUCGGUUUUUUAAAA   39

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:22   UCAAUUGUAGUCAAAAAAUUUU   1
  |*||||||||=|||||||||||
targets:119   AUUUAACAUCGGUUUUUUAAAA   140

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
JB171004.1
ncRNA:22   UCAAUUGUAGUCAAAAAAUUUU   1
  |*||||||||=|||||||||||
targets:18   AUUUAACAUCGGUUUUUUAAAA   39

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:22   UCAAUUGUAGUCAAAAAAUUUU   1
  |*||||||||=|||||||||||
targets:119   AUUUAACAUCGGUUUUUUAAAA   140

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
LQ242673.1
ncRNA:22   UCAAUUGUAGUCAAAAAAUUUU   1
  |*||||||||=||||||||||*
targets:59   AUUUAACAUCGGUUUUUUAAAU   80

2.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:22   UCAAUUGUAGUCAAAAAAUUUU   1
  |*||||||||=||||||||||*
targets:160   AUUUAACAUCGGUUUUUUAAAU   181

2.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
HI410543.1
ncRNA:22   UCAAUUGUAGUCAAAAAAUUUU   1
  |*||||||||=||||||||||*
targets:59   AUUUAACAUCGGUUUUUUAAAU   80

2.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:22   UCAAUUGUAGUCAAAAAAUUUU   1
  |*||||||||=||||||||||*
targets:160   AUUUAACAUCGGUUUUUUAAAU   181

2.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
JB171004.1
ncRNA:22   UCAAUUGUAGUCAAAAAAUUUU   1
  |*||||||||=||||||||||*
targets:59   AUUUAACAUCGGUUUUUUAAAU   80

2.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:22   UCAAUUGUAGUCAAAAAAUUUU   1
  |*||||||||=||||||||||*
targets:160   AUUUAACAUCGGUUUUUUAAAU   181

2.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget