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BaseInfo

ncRNA ID	novel_gma_miR2011
Species	Glycine max
Class	miRNA
Genome position	Chr19:46344036-46344110 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451652;SRR2968978;SRR1451611
Length	21
Mature sequence(if miRNA)	55 - AUCAACUUAUGCACUUCAACU - 75
Stem-loop(if miRNA)	--                C        GAUAUGAUAA   AUCAACUUAUGCACUU AACUUUUG          A   |||||||||||||||| ||||||||          U   UAGUUGAGUACGUGAA UUGAAAAC          G UU                U        AUCUUCGAGA
Stem-loop sequence	AUCAACUUAUGCACUUCAACUUUUGGAUAUGAUAAAUGAGAGCUUCUACAAAAGUUUAAGUGCAUGAGUUGAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006595003.2	ncRNA:21   UCAACUUCACGUAUUCAACUA   1   ||||||=*||||||||||||| targets:4385   AGUUGAGCUGCAUAAGUUGAU   4405 Target Full Sequence	2.0	PREDICTED: Glycine max flowering time control protein FPA-like (LOC100810601), transcript variant X2, mRNA	flowering time control protein FPA-like(LOC100810601)	coding protein	psRNATarget
XM_014775561.1	ncRNA:21   UCAACUUCACGUAUUCAACUA   1   ||||||=||*||||||||||| targets:1821   AGUUGAGGUACAUAAGUUGAU   1841 Target Full Sequence	2.5	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100780294), transcript variant X4, mRNA	protein IQ-DOMAIN 1-like(LOC100780294)	coding protein	psRNATarget
XM_006579763.2	ncRNA:21   UCAACUUCACGUAUUCAACUA   1   ||||||=||*||||||||||| targets:1867   AGUUGAGGUACAUAAGUUGAU   1887 Target Full Sequence	2.5	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100780294), transcript variant X2, mRNA	protein IQ-DOMAIN 1-like(LOC100780294)	coding protein	psRNATarget
XM_006579764.2	ncRNA:21   UCAACUUCACGUAUUCAACUA   1   ||||||=||*||||||||||| targets:1874   AGUUGAGGUACAUAAGUUGAU   1894 Target Full Sequence	2.5	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100780294), transcript variant X3, mRNA	protein IQ-DOMAIN 1-like(LOC100780294)	coding protein	psRNATarget
XM_014775560.1	ncRNA:21   UCAACUUCACGUAUUCAACUA   1   ||||||=||*||||||||||| targets:2309   AGUUGAGGUACAUAAGUUGAU   2329 Target Full Sequence	2.5	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100780294), transcript variant X1, mRNA	protein IQ-DOMAIN 1-like(LOC100780294)	coding protein	psRNATarget
XM_003538956.3	ncRNA:21   UCAACUUCACGUAUUCAACUA   1   =|||||*||*||||||||||| targets:209   GGUUGAUGUCCAUAAGUUGAU   229 Target Full Sequence	2.5	PREDICTED: Glycine max TATA box-binding protein-associated factor RNA polymerase I subunit B (LOC100789168), mRNA	TATA box-binding protein-associated factor RNA polymerase I subunit B(LOC100789168)	coding protein	psRNATarget
XM_003532548.3	ncRNA:21   UCAACUUCAC-GUAUUCAACUA   1   =|||||||||-||||||||||| targets:54   GGUUGAAGUGACAUAAGUUGAU   75 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100784485 (LOC100784485), mRNA	uncharacterized LOC100784485(LOC100784485)	coding protein	psRNATarget