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BaseInfo

ncRNA ID	novel_gma_miR2010
Species	Glycine max
Class	miRNA
Genome position	Chr18:45968044-45968119 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451652
Length	24
Mature sequence(if miRNA)	53 - UUUUUUGAAAAACCGAUGUUAACG - 76
Stem-loop(if miRNA)	--        A      G     -C                UUAACAUC GUUUUU GAAAA  CGAUGUUAACGUAU   |||||||| |||||| |||||  |||||||||||||G   AAUUGUAG CAAAAA UUUUU  GCUACAAUUGUAUA GC        C      G     UA
Stem-loop sequence	UUAACAUCAGUUUUUGGAAAACCGAUGUUAACGUAUGAUAUGUUAACAUCGAUUUUUUGAAAAACCGAUGUUAACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ242673.1	ncRNA:24   GCAAUUGUAGCCAAAAAGUUUUUU   1   **|||||||||||||||=|||||| targets:18   AUUUAACAUCGGUUUUUUAAAAAA   41 Target Full Sequence	1.5	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242673.1	ncRNA:24   GCAAUUGUAGCCAAAAAGUUUUUU   1   **|||||||||||||||=|||||| targets:119   AUUUAACAUCGGUUUUUUAAAAAA   142 Target Full Sequence	1.5	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   GCAAUUGUAGCCAAAAAGUUUUUU   1   **|||||||||||||||=|||||| targets:18   AUUUAACAUCGGUUUUUUAAAAAA   41 Target Full Sequence	1.5	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   GCAAUUGUAGCCAAAAAGUUUUUU   1   **|||||||||||||||=|||||| targets:119   AUUUAACAUCGGUUUUUUAAAAAA   142 Target Full Sequence	1.5	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   GCAAUUGUAGCCAAAAAGUUUUUU   1   **|||||||||||||||=|||||| targets:18   AUUUAACAUCGGUUUUUUAAAAAA   41 Target Full Sequence	1.5	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   GCAAUUGUAGCCAAAAAGUUUUUU   1   **|||||||||||||||=|||||| targets:119   AUUUAACAUCGGUUUUUUAAAAAA   142 Target Full Sequence	1.5	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget
XM_014779358.1	ncRNA:24   GCAA-UUGUAGCCAAAAAGUUUUUU   1   **||-||||||*||*|||||||||| targets:2243   ACUUGAACAUCUGUCUUUCAAAAAA   2267 Target Full Sequence	2.5	PREDICTED: Glycine max TMV resistance protein N-like (LOC100810811), transcript variant X2, mRNA	TMV resistance protein N-like(LOC100810811)	coding protein	psRNATarget
XM_006585964.2	ncRNA:24   GCAA-UUGUAGCCAAAAAGUUUUUU   1   **||-||||||*||*|||||||||| targets:2245   ACUUGAACAUCUGUCUUUCAAAAAA   2269 Target Full Sequence	2.5	PREDICTED: Glycine max TMV resistance protein N-like (LOC100810811), transcript variant X1, mRNA	TMV resistance protein N-like(LOC100810811)	coding protein	psRNATarget
XM_006601416.2	ncRNA:24   GCAA----UUGUAGCCAAAAA-GUUUUUU   1   *|||----|||||||||||||-||||||| targets:419   AGUUUAUCAACAUCGGUUUUUUCAAAAAA   447 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC102666752 (LOC102666752), transcript variant X1, mRNA	uncharacterized LOC102666752(LOC102666752)	coding protein	psRNATarget