ncRNA ID | novel_gma_miR2000 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:30198466-30198519 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451652 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUUCCAGCUUUGCUUUGUCAUG - 22 |
Stem-loop(if miRNA) |
--      GC    CU          U   UUUCCA  UUUG  UUGUCAUGGA C   ||||||  ||||  ||||||||||   AAAGGU  AGAC  AACGGUACUU U AA      AU    AU          U |
Stem-loop sequence | UUUCCAGCUUUGCUUUGUCAUGGAUCUUUUCAUGGCAAUACAGAUAUGGAAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003524565.3 |
|
3.0 | PREDICTED: Glycine max fidgetin-like protein 1 (LOC100776024), mRNA | fidgetin-like protein 1(LOC100776024) | coding protein | psRNATarget |