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BaseInfo

ncRNA ID novel_gma_miR2000
Species Glycine max
Class miRNA
Genome position Chr10:30198466-30198519 [+]
Reference genome Glycine_max_v2.0
Source SRR1451652
Length 22
Mature sequence(if miRNA) 1 - UUUCCAGCUUUGCUUUGUCAUG - 22
Stem-loop(if miRNA) --      GC    CU          U
  UUUCCA  UUUG  UUGUCAUGGA C
  ||||||  ||||  ||||||||||
  AAAGGU  AGAC  AACGGUACUU U
AA      AU    AU          U
Stem-loop sequence UUUCCAGCUUUGCUUUGUCAUGGAUCUUUUCAUGGCAAUACAGAUAUGGAAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524565.3
ncRNA:22   GUACUGUUUCGUUUCGACCUUU   1
  **||*=|=||||||||||||||
targets:938   ACUGCUAGAGCAAAGCUGGAAA   959

3.0 PREDICTED: Glycine max fidgetin-like protein 1 (LOC100776024), mRNA fidgetin-like protein 1(LOC100776024) coding protein psRNATarget