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BaseInfo

ncRNA ID	novel_gma_miR1998
Species	Glycine max
Class	miRNA
Genome position	Chr17:35860698-35860841 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451652
Length	21
Mature sequence(if miRNA)	124 - AUAUUUGUUGGGGUAAAAUUC - 144
Stem-loop(if miRNA)	--       U          UAAUU    -GU        UC  AUUUUU       -U    GG      GACAA   AUUUUAC CUUAACAAAU     UGAC   AUUUUACU  UA      AUGUUUA  CAAU  AUAAAU     G   ||||||| ||||||||||     ||||   ||||||||  ||      |||||||  ||||  ||||||     A   UAAAAUG GGGUUGUUUA     ACUG   UAAAAUGG  GU      UAUAAAU  GUUG  UAUUUA     A CU       -          UAUCU    AUU        GA  ------       UC    AA      AAAUA
Stem-loop sequence	AUUUUACUCUUAACAAAUUAAUUUGACGUAUUUUACUUCUAAUUUUUAUGUUUAUCAAUGGAUAAAUGACAAGAAAUAAAAUUUAUAAGUUGCUUAAAUAUUGAGGGUAAAAUUUAGUCAUCUAUAUUUGUUGGGGUAAAAUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK286941.1	ncRNA:21   CUUAAA--AUGGGGUUGUUUAUA   1   **||||--||||||||||||||| targets:919   AUAUUUGAUACCCCAACAAAUAU   941 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-40-J11	NA	coding protein	psRNATarget
AK243884.1	ncRNA:21   CUUAAA--AUGGGGUUGUUUAUA   1   **||||--||||||||||||||| targets:1009   AUAUUUGAUACCCCAACAAAUAU   1031 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-01-I07	NA	coding protein	psRNATarget
XM_003517177.3	ncRNA:21   CUUAAA--AUGGGGUUGUUUAUA   1   **||||--||||||||||||||| targets:1057   AUAUUUGAUACCCCAACAAAUAU   1079 Target Full Sequence	2.5	PREDICTED: Glycine max putative glucose-6-phosphate 1-epimerase (LOC100797902), mRNA	putative glucose-6-phosphate 1-epimerase(LOC100797902)	coding protein	psRNATarget
DQ006810.1	ncRNA:21   CUUAAAAUGGGGUUGUUUAUA   1   |=|*|*||||||||||||||* targets:856   GGACUAUACCCCAACAAAUAG   876 Target Full Sequence	3.0	Glycine max dehydroascorbate reductase mRNA, complete cds	NA	coding protein	psRNATarget
BT096847.1	ncRNA:21   CUUAAAAUGGGGUUGUUUAUA   1   |=|*|*||||||||||||||* targets:856   GGACUAUACCCCAACAAAUAG   876 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-21C8 unknown mRNA	NA	coding protein	psRNATarget
NM_001250000.2	ncRNA:21   CUUAAAAUGGGGUUGUUUAUA   1   |=|*|*||||||||||||||* targets:902   GGACUAUACCCCAACAAAUAG   922 Target Full Sequence	3.0	Glycine max dehydroascorbate reductase (DHAR3), mRNA	dehydroascorbate reductase(LOC732557)	coding protein	psRNATarget