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BaseInfo

ncRNA ID novel_gma_miR1997
Species Glycine max
Class miRNA
Genome position Chr17:27478768-27478914 [+]
Reference genome Glycine_max_v2.0
Source SRR1451652;SRR1451653;SRR1451655;SRR1451658;SRR1451606;SRR1451607
Length 24
Mature sequence(if miRNA) 124 - AAACAAACACAUUUUGCAAGGACU - 147
Stem-loop(if miRNA) --               A             - A         AC          AUUUUUUU  UGUUCAAAACAC
  UCCUUGCAAAAUGUG UUGUUUUGUUUUU C UCUUAAAGU  UUUAGAUAGU        AG            U
  ||||||||||||||| ||||||||||||| | |||||||||  ||||||||||        ||            U
  AGGAACGUUUUACAC AACAAAACAAAAA G AGGAUUUCA  AAAUCUAUCA        GA            U
UC               A             A A         CA          -------C  AACUUGUCCUUU
Stem-loop sequence UCCUUGCAAAAUGUGAUUGUUUUGUUUUUCAUCUUAAAGUACUUUAGAUAGUAUUUUUUUAGUGUUCAAAACACUUUUUUCCUGUUCAAAGCACUAUCUAAAACACUUUAGGAAGAAAAAACAAAACAAACACAUUUUGCAAGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006597742.2
ncRNA:24   UCAGGAACGUUUUACACAAACAAA   1
  **||*||*=|=|||||||||||||
targets:3581   UUUCAUUAUAGAAUGUGUUUGUUU   3604

3.0 PREDICTED: Glycine max uncharacterized LOC102660146 (LOC102660146), mRNA uncharacterized LOC102660146(LOC102660146) coding protein psRNATarget