ncRNA ID | novel_gma_miR1997 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:27478768-27478914 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451652;SRR1451653;SRR1451655;SRR1451658;SRR1451606;SRR1451607 |
Length | 24 |
Mature sequence(if miRNA) | 124 - AAACAAACACAUUUUGCAAGGACU - 147 |
Stem-loop(if miRNA) |
--               A             - A         AC          AUUUUUUU  UGUUCAAAACAC   UCCUUGCAAAAUGUG UUGUUUUGUUUUU C UCUUAAAGU  UUUAGAUAGU        AG            U   ||||||||||||||| ||||||||||||| | |||||||||  ||||||||||        ||            U   AGGAACGUUUUACAC AACAAAACAAAAA G AGGAUUUCA  AAAUCUAUCA        GA            U UC               A             A A         CA          -------C  AACUUGUCCUUU |
Stem-loop sequence | UCCUUGCAAAAUGUGAUUGUUUUGUUUUUCAUCUUAAAGUACUUUAGAUAGUAUUUUUUUAGUGUUCAAAACACUUUUUUCCUGUUCAAAGCACUAUCUAAAACACUUUAGGAAGAAAAAACAAAACAAACACAUUUUGCAAGGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006597742.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102660146 (LOC102660146), mRNA | uncharacterized LOC102660146(LOC102660146) | coding protein | psRNATarget |