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BaseInfo

ncRNA ID novel_gma_miR1988
Species Glycine max
Class miRNA
Genome position Chr14:7214403-7214507 [-]
Reference genome Glycine_max_v2.0
Source SRR1451652;SRR1451655
Length 24
Mature sequence(if miRNA) 1 - UAAUAAGAGGAUCAAAUUGAACUU - 24
Stem-loop(if miRNA) --U        -U  A         UAG       C          UAUUUUUA
   UUCAAUUU  UC UCUUAUUAU   UGAAGGA UUAAUUAAGU        A
   ||||||||  || |||||||||   ||||||| ||||||||||        A
   AAGUUAAA  AG AGAAUAAUA   AUUUUCU AGUUAAUUCA        A
UUC        CU  G         ---       A          UAACAUUA
Stem-loop sequence UUUCAAUUUUUCAUCUUAUUAUUAGUGAAGGACUUAAUUAAGUUAUUUUUAAAAAUUACAAUACUUAAUUGAAUCUUUUAAUAAUAAGAGGAUCAAAUUGAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
DQ857275.1
ncRNA:24   UUCAAGUUAAACUAGGAGAAUAAU   1
  |||--||||*||||||||||=|||
targets:295   AAG--CAAUCUGAUCCUCUUGUUA   316

2.5 Glycine max Dof24 mRNA, partial cds NA coding protein psRNATarget
XM_003529260.3
ncRNA:24   UUCAAGUUAAACUAGGAGAAUAAU   1
  |||--||||*||||||||||=|||
targets:290   AAG--CAAUCUGAUCCUCUUGUUA   311

2.5 PREDICTED: Glycine max dof zinc finger protein DOF3.2-like (LOC100818111), mRNA dof zinc finger protein DOF3.2-like(LOC100818111) coding protein psRNATarget