ncRNA ID | novel_gma_miR1988 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:7214403-7214507 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451652;SRR1451655 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAAUAAGAGGAUCAAAUUGAACUU - 24 |
Stem-loop(if miRNA) |
--U        -U  A         UAG       C          UAUUUUUA    UUCAAUUU  UC UCUUAUUAU   UGAAGGA UUAAUUAAGU        A    ||||||||  || |||||||||   ||||||| ||||||||||        A    AAGUUAAA  AG AGAAUAAUA   AUUUUCU AGUUAAUUCA        A UUC        CU  G         ---       A          UAACAUUA |
Stem-loop sequence | UUUCAAUUUUUCAUCUUAUUAUUAGUGAAGGACUUAAUUAAGUUAUUUUUAAAAAUUACAAUACUUAAUUGAAUCUUUUAAUAAUAAGAGGAUCAAAUUGAACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
DQ857275.1 |
|
2.5 | Glycine max Dof24 mRNA, partial cds | NA | coding protein | psRNATarget | |||||||||
XM_003529260.3 |
|
2.5 | PREDICTED: Glycine max dof zinc finger protein DOF3.2-like (LOC100818111), mRNA | dof zinc finger protein DOF3.2-like(LOC100818111) | coding protein | psRNATarget |