Search result

BaseInfo

ncRNA ID	novel_gma_miR1979
Species	Glycine max
Class	miRNA
Genome position	Chr1:1847868-1847973 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451652
Length	23
Mature sequence(if miRNA)	84 - AUAAAUUAGAGGACCAAAAUACU - 106
Stem-loop(if miRNA)	--      A            -------------        GAU    ---U   UUU  G   UAUUUU GUCUUCUAAUUU             UUAAAAUU   UCAU    UAU   UU G   |||||| ||||||||||||             ||||||||   ||||    |||   ||   AUAAAA CAGGAGAUUAAA             AAUUUUAG   AGUG    AUA   AA A UC      C            UAGUAAUUCACCA        --U    UUUU   UAU  A
Stem-loop sequence	UAUUUUAGUCUUCUAAUUUUUAAAAUUGAUUCAUUUAUUUUUUGGAAAAUAUAUAUUUUGUGAUGAUUUUAAACCACUUAAUGAUAAAUUAGAGGACCAAAAUACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003556792.3	ncRNA:23   UCAUAAAACCAGGAGAUUAAAUA   1   |**||||||*||||||||||||* targets:1752   AUAAUUUUGAUCCUCUAAUUUAA   1774 Target Full Sequence	2.0	PREDICTED: Glycine max 7-deoxyloganetin glucosyltransferase (LOC100816809), mRNA	7-deoxyloganetin glucosyltransferase(LOC100816809)	coding protein	psRNATarget
XM_003549988.3	ncRNA:23   UC-AUAAAAC-CAGGAGAUUAAAUA   1   ||-|=||||*-|||||||||||||| targets:278   AGCUGUUUUAUGUCCUCUAAUUUAU   302 Target Full Sequence	3.0	PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At4g37250 (LOC100784503), mRNA	probable LRR receptor-like serine/threonine-protein kinase At4g37250(LOC100784503)	coding protein	psRNATarget