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BaseInfo

ncRNA ID novel_gma_miR1978
Species Glycine max
Class miRNA
Genome position Chr12:30827212-30827413 [+]
Reference genome Glycine_max_v2.0
Source SRR1451652;SRR1451653;SRR1451654;SRR1451655;SRR1451657;SRR1451658;SRR1451661;SRR1451605;SRR1451607;SRR1451609
Length 24
Mature sequence(if miRNA) 1 - AAUCGAUUACAGGAUUUUGGUAAU - 24
Stem-loop(if miRNA) --        -A    A     G    C      A   UU   UUUCU   GAGU    UA           UUUC    A   CUUCACUG            AAA
  AAUCGAUU  CAGG UUUUG UAAU GAUUAC CAG  AUA     GAA    CAUG  UUUUCAAAGUU    UGAA UUU        GUAAUCGAUUAC   A
  ||||||||  |||| ||||| |||| |||||| |||  |||     |||    ||||  |||||||||||    |||| |||        ||||||||||||   U
  UUAGCUAA  GUUC AAGAC AUUA CUAAUG GUC  UAU     CUU    GUAC  AAAAGUUUUAA    ACUU AAA        CAUUAGCUAAUG   C
CA        AG    -     -    A      -   UC   -----   ACGU    CG           ---U    A   -UUUAAUA            GUU
Stem-loop sequence AAUCGAUUACAGGAUUUUGGUAAUCGAUUACACAGUUAUAUUUCUGAAGAGUCAUGUAUUUUCAAAGUUUUUCUGAAAUUUCUUCACUGGUAAUCGAUUACAAAAUCUUGGUAAUCGAUUACAUAAUUUAAAAUUCAUAAUUUUGAAAAGCCAUGUGCAUUCUAUCUCUGGUAAUCAAUUACAGAACUUGGAAAUCGAUUAC