ncRNA ID | novel_gma_miR1978 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:30827212-30827413 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451652;SRR1451653;SRR1451654;SRR1451655;SRR1451657;SRR1451658;SRR1451661;SRR1451605;SRR1451607;SRR1451609 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUCGAUUACAGGAUUUUGGUAAU - 24 |
Stem-loop(if miRNA) |
--        -A    A     G    C      A   UU   UUUCU   GAGU    UA           UUUC    A   CUUCACUG            AAA   AAUCGAUU  CAGG UUUUG UAAU GAUUAC CAG  AUA     GAA    CAUG  UUUUCAAAGUU    UGAA UUU        GUAAUCGAUUAC   A   ||||||||  |||| ||||| |||| |||||| |||  |||     |||    ||||  |||||||||||    |||| |||        ||||||||||||   U   UUAGCUAA  GUUC AAGAC AUUA CUAAUG GUC  UAU     CUU    GUAC  AAAAGUUUUAA    ACUU AAA        CAUUAGCUAAUG   C CA        AG    -     -    A      -   UC   -----   ACGU    CG           ---U    A   -UUUAAUA            GUU |
Stem-loop sequence | AAUCGAUUACAGGAUUUUGGUAAUCGAUUACACAGUUAUAUUUCUGAAGAGUCAUGUAUUUUCAAAGUUUUUCUGAAAUUUCUUCACUGGUAAUCGAUUACAAAAUCUUGGUAAUCGAUUACAUAAUUUAAAAUUCAUAAUUUUGAAAAGCCAUGUGCAUUCUAUCUCUGGUAAUCAAUUACAGAACUUGGAAAUCGAUUAC |