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BaseInfo

ncRNA ID novel_gma_miR1972
Species Glycine max
Class miRNA
Genome position Chr1:13450979-13451031 [-]
Reference genome Glycine_max_v2.0
Source SRR1451652
Length 24
Mature sequence(if miRNA) 30 - UUUGAAGAAAACCGAUGUUAACCU - 53
Stem-loop(if miRNA) -   GA      C          CUA
 UUU  AGAAAA CGAUGUUAAC   U
 |||  |||||| ||||||||||
 AAA  UUUUUU GCUACAAUUG   G
C   AG      A          CUU
Stem-loop sequence UUUGAAGAAAACCGAUGUUAACCUAUGUUCGUUAACAUCGAUUUUUUGAAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003553751.3
ncRNA:24   UCCAAUUGUAGCCAAAAGAAGUUU   1
  ||***|||||=||||||||*||||
targets:402   AGAAAAACAUUGGUUUUCUACAAA   425

2.5 PREDICTED: Glycine max NAC domain-containing protein 43 (LOC100807338), mRNA NAC domain-containing protein 43(LOC100807338) coding protein psRNATarget
XM_014771745.1
ncRNA:24   UCCAAUUGUAGCCAAAAGAAGUUU   1
  ||***|||||=||||||||*||||
targets:471   AGAAAAACAUUGGUUUUCUACAAA   494

2.5 PREDICTED: Glycine max NAC domain-containing protein 43-like (LOC100808411), mRNA NAC domain-containing protein 43-like(LOC100808411) coding protein psRNATarget