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BaseInfo

ncRNA ID novel_gma_miR1967
Species Glycine max
Class miRNA
Genome position Chr1:25272816-25272868 [-]
Reference genome Glycine_max_v2.0
Source SRR1451652;SRR1451653;SRR1295525;SRR1451604;SRR1451611;SRR1451612;SRR1451621
Length 24
Mature sequence(if miRNA) 1 - AACCGAUGUAGAAUGUUCAGCAUU - 24
Stem-loop(if miRNA) --   AAU                - U
  UGC   GCAUUCUACAUCGGUU C U
  |||   |||||||||||||||| |
  ACG   UGUAAGAUGUAGCCAA G A
UU   ACU                C G
Stem-loop sequence UGCAAUGCAUUCUACAUCGGUUCUUAGGCAACCGAUGUAGAAUGUUCAGCAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:24   UUACGACUUGUAAGAUGUAGCCAA   1
  ||||*|||*||||=||||||||||
targets:542   AAUGAUGACCAUUUUACAUCGGUU   565

2.5 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_014767461.1
ncRNA:24   UUACGACUUGUAAGAUGUAGCCAA   1
  ||||=**=||||||||||||||||
targets:2143   AAUGUCCGACAUUCUACAUCGGUU   2166

3.0 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget