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BaseInfo

ncRNA ID novel_gma_miR1966
Species Glycine max
Class miRNA
Genome position Chr1:26647169-26647242 [-]
Reference genome Glycine_max_v2.0
Source SRR1451652;SRR1451660;SRR1451662;SRR1451611
Length 24
Mature sequence(if miRNA) 1 - ACCCGCGGAAGAUCCUGCAGAACC - 24
Stem-loop(if miRNA) --       A           UCA   U        AC
  UUCUGCA GAUCUUUCGCG   UCC GCGGAAGA  C
  ||||||| |||||||||||   ||| ||||||||
  AAGACGU CUAGAAGGCGC   AGG CGCCUUCU  U
CC       C           -CC   -        GU
Stem-loop sequence UUCUGCAAGAUCUUUCGCGUCAUCCUGCGGAAGAACCUUGUCUUCCGCGGACCCGCGGAAGAUCCUGCAGAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006574210.1
ncRNA:24   CCAAGACGUCCUAGAAGGCGCCCA   1
  |*|||||||||||||||||||*|*
targets:173   GCUUCUGCAGGAUCUUCCGCGUGA   196

2.5 PREDICTED: Glycine max uncharacterized LOC102668039 (LOC102668039), mRNA uncharacterized LOC102668039(LOC102668039) coding protein psRNATarget
XM_006575771.1
ncRNA:24   CCAAGACGUCCUAGAAGGCGCCCA   1
  |*|||||||||||||||||||*|*
targets:48   GAUUCUGCAGGAUCUUCCGCGUGA   71

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102663234), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102663234) coding protein psRNATarget