ncRNA ID | novel_gma_miR1962 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:29645278-29645360 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451652 |
Length | 24 |
Mature sequence(if miRNA) | 60 - CAUUUUAAGACGGUUUUCUGAAAA - 83 |
Stem-loop(if miRNA) |
--C                C   -                CU    AUUUUAAGACGGUUUU UGA AAAAUCGUCUUAGAAU  C    |||||||||||||||| ||| ||||||||||||||||    UAAGAUUCUGCCAAAA GCU UUUUGGCAGAAUCUUA  U AAC                A   C                CA |
Stem-loop sequence | CAUUUUAAGACGGUUUUCUGAAAAAUCGUCUUAGAAUCUCUACAUUCUAAGACGGUUUUCUCGAAAAACCGUCUUAGAAUCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014763138.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA | uncharacterized LOC100806242(LOC100806242) | coding protein | psRNATarget | |||||||||
XM_006589010.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA | uncharacterized LOC100806242(LOC100806242) | coding protein | psRNATarget |