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BaseInfo

ncRNA ID novel_gma_miR1962
Species Glycine max
Class miRNA
Genome position Chr11:29645278-29645360 [-]
Reference genome Glycine_max_v2.0
Source SRR1451652
Length 24
Mature sequence(if miRNA) 60 - CAUUUUAAGACGGUUUUCUGAAAA - 83
Stem-loop(if miRNA) --C                C   -                CU
   AUUUUAAGACGGUUUU UGA AAAAUCGUCUUAGAAU  C
   |||||||||||||||| ||| ||||||||||||||||
   UAAGAUUCUGCCAAAA GCU UUUUGGCAGAAUCUUA  U
AAC                A   C                CA
Stem-loop sequence CAUUUUAAGACGGUUUUCUGAAAAAUCGUCUUAGAAUCUCUACAUUCUAAGACGGUUUUCUCGAAAAACCGUCUUAGAAUCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763138.1
ncRNA:24   AAAAGUCUUUUGGCAGAAUUUUAC   1
  ||||=|||=||||||||||=||||
targets:1426   UUUUUAGAGAACCGUCUUAGAAUG   1449

2.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_006589010.2
ncRNA:24   AAAAGUCUUUUGGCAGAAUUUUAC   1
  ||||=|||=||||||||||=||||
targets:2135   UUUUUAGAGAACCGUCUUAGAAUG   2158

2.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget