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BaseInfo

ncRNA ID novel_gma_miR1958
Species Glycine max
Class miRNA
Genome position Chr5:3088194-3088278 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650
Length 22
Mature sequence(if miRNA) 1 - UAUUUGGAUGGAGAAUUUUAAC - 22
Stem-loop(if miRNA) --    UG  UG A        --   AAUAAAAGUAAUUUAU
  UAUU  GA  G GAAUUUUA  ACU                A
  ||||  ||  | ||||||||  |||                A
  AUAA  UU  U CUUAAAAU  AAU                G
UU    GU  GU A        CU   GUCUUUGAAUUUAAAA
Stem-loop sequence UAUUUGGAUGGAGAAUUUUAACUAAUAAAAGUAAUUUAUAAGAAAAUUUAAGUUUCUGUAAUCUAAAAUUCAUUGUUUGAAUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098984.1
ncRNA:22   CAAUUUUAAGAGGUAGGUUUAU   1
  |**|=||||*||||||||||||
targets:253   GCCAGAAUUAUCCAUCCAAAUA   274

2.5 Soybean clone JCVI-FLGm-13G16 unknown mRNA NA coding protein psRNATarget
XM_006575606.2
ncRNA:22   CAAUUUUAAGAGGUAGGUUUAU   1
  **|||*||||||||||*|||||
targets:2712   AAUAAUAUUCUCCAUCAAAAUA   2733

2.5 PREDICTED: Glycine max uncharacterized LOC102669110 (LOC102669110), transcript variant X1, mRNA uncharacterized LOC102669110(LOC102669110) coding protein psRNATarget