ncRNA ID | novel_gma_miR1958 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:3088194-3088278 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451650 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UAUUUGGAUGGAGAAUUUUAAC - 22 |
Stem-loop(if miRNA) |
--    UG  UG A        --   AAUAAAAGUAAUUUAU   UAUU  GA  G GAAUUUUA  ACU                A   ||||  ||  | ||||||||  |||                A   AUAA  UU  U CUUAAAAU  AAU                G UU    GU  GU A        CU   GUCUUUGAAUUUAAAA |
Stem-loop sequence | UAUUUGGAUGGAGAAUUUUAACUAAUAAAAGUAAUUUAUAAGAAAAUUUAAGUUUCUGUAAUCUAAAAUUCAUUGUUUGAAUAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT098984.1 |
|
2.5 | Soybean clone JCVI-FLGm-13G16 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_006575606.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102669110 (LOC102669110), transcript variant X1, mRNA | uncharacterized LOC102669110(LOC102669110) | coding protein | psRNATarget |