ncRNA ID | novel_gma_miR1954 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:41049288-41049381 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451650;SRR1451658;SRR1451606 |
Length | 24 |
Mature sequence(if miRNA) | 71 - AUUUUGAAUUUGAAUUUUGAACCU - 94 |
Stem-loop(if miRNA) |
---A                UG ACCUA  AUCGAUUACCGGAUGUUUG     UUUUGAAUUUGAAUUU  A     UA                   U     ||||||||||||||||  |     ||                   A     AAAACUUAAACUUAAA  U     UC                   A ACUG                GU ----C  AAAGCAACGACCAUUAGCU |
Stem-loop sequence | AUUUUGAAUUUGAAUUUUGAACCUAUAAUCGAUUACCGGAUGUUUGUAAUCGAUUACCAGCAACGAAACUCUUGAAAUUCAAAUUCAAAAGUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003516345.3 |
|
1.5 | PREDICTED: Glycine max protein trichome birefringence-like 35 (LOC100789791), mRNA | protein trichome birefringence-like 35(LOC100789791) | coding protein | psRNATarget | |||||||||
XM_003518412.3 |
|
1.5 | PREDICTED: Glycine max BTB/POZ and MATH domain-containing protein 4 (LOC100806769), mRNA | BTB/POZ and MATH domain-containing protein 4(LOC100806769) | coding protein | psRNATarget |