ncRNA ID | novel_gma_miR1942 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:39534859-39535045 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451650 |
Length | 21 |
Mature sequence(if miRNA) | 167 - CAAAUGGAAUGCAAGGUCGCU - 187 |
Stem-loop(if miRNA) |
--CA         C  ---   CG   -  --------    --C     --C              CUCUAC   U GCAAGUAAUAAAUCUCUGUACUAGUU     AAUGGAAUG AA   GGU  CUA CA        ACCU   UAAAU   AAUGAGAGAUACAA      GUU C                          U     ||||||||| ||   |||  ||| ||        ||||   |||||   ||||||||||||||      ||| |     UUACUUUAC UU   UCA  GAU GU        UGGG   AUUUA   UUAUUUUUUAUGUU      UUA G                          U AUAC         U  UUA   AU   U  UUAUUUCU    UUU     AAU              -----A   C AGUUUGAUUAUGUCUACAAUUGAUUA |
Stem-loop sequence | CAAAUGGAAUGCAAGGUCGCUACAACCUCUAAAUCAAUGAGAGAUACAACUCUACGUUUCGCAAGUAAUAAAUCUCUGUACUAGUUUUAUUAGUUAACAUCUGUAUUAGUUUGAGCAUUAUUGUAUUUUUUAUUUAAAUUUAUUUGGGUUCUUUAUUUGUUAGUAACUAUUUUUCAUUUCAUUCAUA |