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BaseInfo

ncRNA ID	novel_gma_miR1940
Species	Glycine max
Class	miRNA
Genome position	Chr3:26891332-26891496 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451650;SRR1451610;SRR1451626
Length	24
Mature sequence(if miRNA)	1 - UUUAACAUCGGUUAUUUGAAAACU - 24
Stem-loop(if miRNA)	--U                            G     A              UUUUUUUUAAAA   AUAAAUAAAUCAUACUAAAU    UUAACAUCGGUUAUUUGAAAACUGAUGU GUUAA CAUUUACAACAUCG            UAU                    U    |||||||||||||||||||||||||||| ||||| ||||||||||||||            |||    AAUUGUAGCCAAUAAACUUUUGGCUACA CAAUU GUGAAUGUUGUAGC            AAG                    C GAU                            G     C              ---------CAA   UUUAUUGUCUACAAUUUUGA
Stem-loop sequence	UUUAACAUCGGUUAUUUGAAAACUGAUGUGGUUAAACAUUUACAACAUCGUUUUUUUUAAAAUAUAUAAAUAAAUCAUACUAAAUUCAGUUUUAACAUCUGUUAUUUGAAAACCGAUGUUGUAAGUGCUUAACGACAUCGGUUUUCAAAUAACCGAUGUUAAUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014776578.1	ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUU   1   |||||||||||||||*|||||||* targets:1638   AGUUUUCAAAUAACCAAUGUUAAC   1661 Target Full Sequence	2.5	PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA	ankyrin repeat and SOCS box protein 7-like(LOC100786031)	coding protein	psRNATarget
LQ242673.1	ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUU   1   =*||||=||||||||*|||||||| targets:171   GUUUUUUAAAUAACCAAUGUUAAA   194 Target Full Sequence	2.5	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUU   1   =*||||=||||||||*|||||||| targets:171   GUUUUUUAAAUAACCAAUGUUAAA   194 Target Full Sequence	2.5	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUU   1   =*||||=||||||||*|||||||| targets:171   GUUUUUUAAAUAACCAAUGUUAAA   194 Target Full Sequence	2.5	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget