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BaseInfo

ncRNA ID	novel_gma_miR1933
Species	Glycine max
Class	miRNA
Genome position	Chr1:43039701-43039776 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451650;SRR1451652;SRR1451661;SRR1753105;SRR1753107;SRR1451605;SRR1451606;SRR1451608;SRR1451609;SRR1451610;SRR1451624;SRR1451626
Length	22
Mature sequence(if miRNA)	1 - AAUCAAGUUGAUCCGUAAGACU - 22
Stem-loop(if miRNA)	--     A                  ---U  GGGAACU   UCUUA GGAUCAACUUGAUUCAUA    GA       U   ||||| ||||||||||||||||||    ||       C   AGAAU CCUAGUUGAACUAAGUAU    AG       A UC     G                  UUUC  AAUGCUU
Stem-loop sequence	UCUUAAGGAUCAACUUGAUUCAUAUGAGGGAACUUCAUUCGUAAGACUUUUAUGAAUCAAGUUGAUCCGUAAGACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006600975.2	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   ||*||||||||||||||||||* targets:1247   AGCCUUACGGAUCAACUUGAUC   1268 Target Full Sequence	1.0	PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA	basic leucine zipper 9-like(LOC100776831)	coding protein	psRNATarget
XM_014768353.1	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   ***||||=|||||||||||||* targets:1047   CAACUUAUGGAUCAACUUGAUC   1068 Target Full Sequence	2.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_003547498.3	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   ***||||=|||||||||||||* targets:452   CAACUUAUGGAUCAACUUGAUC   473 Target Full Sequence	2.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014767164.1	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   **|||||*|||||||||||||* targets:813   CAUCUUAAGGAUCAACUUGAUA   834 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100796601 (LOC100796601), transcript variant X1, mRNA	uncharacterized LOC100796601(LOC100796601)	coding protein	psRNATarget
XM_006584073.2	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   **|||||*|||||||||||||* targets:909   CUUCUUAAGGAUCAACUUGAUG   930 Target Full Sequence	2.0	PREDICTED: Glycine max mitotic spindle checkpoint protein MAD1-like (LOC100808312), transcript variant X4, mRNA	mitotic spindle checkpoint protein MAD1-like(LOC100808312)	coding protein	psRNATarget
XM_003549965.3	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   **|||||*|||||||||||||* targets:728   CAUCUUAAGGAUCAACUUGAUG   749 Target Full Sequence	2.0	PREDICTED: Glycine max mitotic spindle checkpoint protein MAD1-like (LOC100817261), transcript variant X2, mRNA	mitotic spindle checkpoint protein MAD1-like(LOC100817261)	coding protein	psRNATarget
XM_006584072.2	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   **|||||*|||||||||||||* targets:932   CUUCUUAAGGAUCAACUUGAUG   953 Target Full Sequence	2.0	PREDICTED: Glycine max mitotic spindle checkpoint protein MAD1-like (LOC100808312), transcript variant X3, mRNA	mitotic spindle checkpoint protein MAD1-like(LOC100808312)	coding protein	psRNATarget
XM_006600200.2	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   **|||||*|||||||||||||* targets:732   CAUCUUAAGGAUCAACUUGAUG   753 Target Full Sequence	2.0	PREDICTED: Glycine max mitotic spindle checkpoint protein MAD1-like (LOC100817261), transcript variant X1, mRNA	mitotic spindle checkpoint protein MAD1-like(LOC100817261)	coding protein	psRNATarget
XM_006584071.1	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   **|||||*|||||||||||||* targets:965   CUUCUUAAGGAUCAACUUGAUG   986 Target Full Sequence	2.0	PREDICTED: Glycine max mitotic spindle checkpoint protein MAD1-like (LOC100808312), transcript variant X1, mRNA	mitotic spindle checkpoint protein MAD1-like(LOC100808312)	coding protein	psRNATarget
XM_003529649.3	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   **|||||*|||||||||||||* targets:944   CUUCUUAAGGAUCAACUUGAUG   965 Target Full Sequence	2.0	PREDICTED: Glycine max mitotic spindle checkpoint protein MAD1-like (LOC100808312), transcript variant X2, mRNA	mitotic spindle checkpoint protein MAD1-like(LOC100808312)	coding protein	psRNATarget
XM_006593444.2	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   ||-|*||||||||||*|||||| targets:3673   AG-CAUACGGAUCAAGUUGAUU   3693 Target Full Sequence	2.5	PREDICTED: Glycine max calcium-transporting ATPase 8, plasma membrane-type-like (LOC100813841), transcript variant X11, mRNA	calcium-transporting ATPase 8, plasma membrane-type-like(LOC100813841)	coding protein	psRNATarget
XM_014768353.1	ncRNA:22   UCAGAA-UGCCUAGUUGAACUAA   1   |*||||-|||||||||||||||* targets:506   AAUCUUUACGGAUCAACUUGAUC   528 Target Full Sequence	3.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_003518778.3	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   *||*|||=*||||||||||||| targets:2776   UGUAUUAUUGAUCAACUUGAUU   2797 Target Full Sequence	3.0	PREDICTED: Glycine max phosphate transporter PHO1 homolog 1-like (LOC100787164), mRNA	phosphate transporter PHO1 homolog 1-like(LOC100787164)	coding protein	psRNATarget
XM_003516820.3	ncRNA:22   UCAGAAUGCCUAGUUGAACUAA   1   *||*|||=*||||||||||||| targets:2895   UGUAUUAUUGAUCAACUUGAUU   2916 Target Full Sequence	3.0	PREDICTED: Glycine max phosphate transporter PHO1 homolog 1-like (LOC100786083), mRNA	phosphate transporter PHO1 homolog 1-like(LOC100786083)	coding protein	psRNATarget