ncRNA ID | novel_gma_miR1932 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:35855437-35855529 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451650;SRR1451655;SRR1451662;SRR1451606;SRR1451607;SRR1451608;SRR1451611;SRR1451621;SRR1451626 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUUGAAUUUGAAUUUUGAACCU - 24 |
Stem-loop(if miRNA) |
--                 UG ---------AC   -       A   CAU   AUUUUGAAUUUGAAUUU  A           CUG UAAUCGA UAC   A   |||||||||||||||||  |           ||| ||||||| |||   U   UAAAACUUAAACUUAAA  U           GAC AUUAGCU AUG   G CU                 GU CUCAAAGCAAC   C       A   UUU |
Stem-loop sequence | AUUUUGAAUUUGAAUUUUGAACCUGUAAUCGAAUACCAUAUGUUUGUAAUCGAUUACCAGCAACGAAACUCUUGAAAUUCAAAUUCAAAAUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003516345.3 |
|
1.5 | PREDICTED: Glycine max protein trichome birefringence-like 35 (LOC100789791), mRNA | protein trichome birefringence-like 35(LOC100789791) | coding protein | psRNATarget | |||||||||
XM_003518412.3 |
|
1.5 | PREDICTED: Glycine max BTB/POZ and MATH domain-containing protein 4 (LOC100806769), mRNA | BTB/POZ and MATH domain-containing protein 4(LOC100806769) | coding protein | psRNATarget |