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BaseInfo

ncRNA ID novel_gma_miR1932
Species Glycine max
Class miRNA
Genome position Chr2:35855437-35855529 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650;SRR1451655;SRR1451662;SRR1451606;SRR1451607;SRR1451608;SRR1451611;SRR1451621;SRR1451626
Length 24
Mature sequence(if miRNA) 1 - AUUUUGAAUUUGAAUUUUGAACCU - 24
Stem-loop(if miRNA) --                 UG ---------AC   -       A   CAU
  AUUUUGAAUUUGAAUUU  A           CUG UAAUCGA UAC   A
  |||||||||||||||||  |           ||| ||||||| |||   U
  UAAAACUUAAACUUAAA  U           GAC AUUAGCU AUG   G
CU                 GU CUCAAAGCAAC   C       A   UUU
Stem-loop sequence AUUUUGAAUUUGAAUUUUGAACCUGUAAUCGAAUACCAUAUGUUUGUAAUCGAUUACCAGCAACGAAACUCUUGAAAUUCAAAUUCAAAAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003516345.3
ncRNA:24   UCCA---AGUUUUAAGUUUAAGUUUUA   1
  |||*---||||||||||||*|||||||
targets:189   AGGAAAAUCAAAAUUCAAAAUCAAAAU   215

1.5 PREDICTED: Glycine max protein trichome birefringence-like 35 (LOC100789791), mRNA protein trichome birefringence-like 35(LOC100789791) coding protein psRNATarget
XM_003518412.3
ncRNA:24   UCCAAGUUUUAAGUUUAAGUUUUA   1
  ****|||||||||||||||*||||
targets:134   UAAAUCAAAAUUCAAAUUCCAAAU   157

1.5 PREDICTED: Glycine max BTB/POZ and MATH domain-containing protein 4 (LOC100806769), mRNA BTB/POZ and MATH domain-containing protein 4(LOC100806769) coding protein psRNATarget