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BaseInfo

ncRNA ID novel_gma_miR1926
Species Glycine max
Class miRNA
Genome position Chr20:36443556-36443704 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650;SRR1451653;SRR1451657;SRR1451625
Length 20
Mature sequence(if miRNA) 130 - UGAUUUCCUUCGGUUCCUCU - 149
Stem-loop(if miRNA)    A     U        G       A    A   -         -------------      --U      ---C    CU
AGA GAGCU GAGGAAGU AUGGGAG UGGG GGG UCGGUAAAG             AAUAUA   CUGAGA    UCGA  C
||| ||||| |||||||| ||||||| |||| ||| |||||||||             ||||||   ||||||    ||||  A
UCU CUUGG UUCCUUUA UAUCCUU ACCC CCU AGCCGUUUU             UUGUGU   GACUCU    AGCU  A
   C     C        G       -    A   U         CCUAUUUGUUUUG      UGU      CUCU    CU
Stem-loop sequence AGAAGAGCUUGAGGAAGUGAUGGGAGAUGGGAGGGUCGGUAAAGAAUAUAUCUGAGACUCGACUCAAUCUCGAUCUCUCUCAGUGUUGUGUUGUUUUGUUUAUCCUUUUGCCGAUUCCACCCAUUCCUAUGAUUUCCUUCGGUUCCUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535524.2
ncRNA:20   UCUCCUUGGCUUCCUUUAGU   1
  =|*||||||||||||||||*
targets:666   GGUGGAACCGAAGGAAAUCU   685

2.0 PREDICTED: Glycine max serine decarboxylase 1-like (LOC100781665), mRNA serine decarboxylase 1-like(LOC100781665) coding protein psRNATarget