ncRNA ID | novel_gma_miR1926 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:36443556-36443704 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451650;SRR1451653;SRR1451657;SRR1451625 |
Length | 20 |
Mature sequence(if miRNA) | 130 - UGAUUUCCUUCGGUUCCUCU - 149 |
Stem-loop(if miRNA) |
   A     U        G       A    A   -         -------------      --U      ---C    CU AGA GAGCU GAGGAAGU AUGGGAG UGGG GGG UCGGUAAAG             AAUAUA   CUGAGA    UCGA  C ||| ||||| |||||||| ||||||| |||| ||| |||||||||             ||||||   ||||||    ||||  A UCU CUUGG UUCCUUUA UAUCCUU ACCC CCU AGCCGUUUU             UUGUGU   GACUCU    AGCU  A    C     C        G       -    A   U         CCUAUUUGUUUUG      UGU      CUCU    CU |
Stem-loop sequence | AGAAGAGCUUGAGGAAGUGAUGGGAGAUGGGAGGGUCGGUAAAGAAUAUAUCUGAGACUCGACUCAAUCUCGAUCUCUCUCAGUGUUGUGUUGUUUUGUUUAUCCUUUUGCCGAUUCCACCCAUUCCUAUGAUUUCCUUCGGUUCCUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003535524.2 |
|
2.0 | PREDICTED: Glycine max serine decarboxylase 1-like (LOC100781665), mRNA | serine decarboxylase 1-like(LOC100781665) | coding protein | psRNATarget |