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BaseInfo

ncRNA ID novel_gma_miR1924
Species Glycine max
Class miRNA
Genome position Chr20:8782078-8782228 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650
Length 22
Mature sequence(if miRNA) 130 - CAAGUGAACCCAUCGGUAGUGA - 151
Stem-loop(if miRNA) --    UU  CA A          G                UUAAAAAA  UGA   UGA   GUU     UU   U
  AUUG  GA  G UUCACUUGGA CUUACCCUCAAGGUCU        AU   GCU   UUU   CUUCU  UGA G
  ||||  ||  | |||||||||| ||||||||||||||||        ||   |||   |||   |||||  |||
  UGAU  CU  C AAGUGAACCU GAAUGGGAGUUCCAGG        UA   UGA   AAG   GAGGA  AUU U
AG    GG  AC C          G                UAGGAUAG  -UG   -UG   -AU     UU   U
Stem-loop sequence AUUGUUGACAGAUUCACUUGGAGCUUACCCUCAAGGUCUUUAAAAAAAUUGAGCUUGAUUUGUUCUUCUUUUGAUGUUUUAUUAGGAGUAGAAGUAGUGUAUGAUAGGAUGGACCUUGAGGGUAAGGUCCAAGUGAACCCAUCGGUAGUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014765509.1
ncRNA:22   AGUGAUGGCUACCCAAGUGAAC   1
  |==||=|*|||||||||||||*
targets:2017   UUGCUGCGGAUGGGUUCACUUA   2038

3.0 PREDICTED: Glycine max U-box domain-containing protein 34-like (LOC100820557), mRNA U-box domain-containing protein 34-like(LOC100820557) coding protein psRNATarget
XM_003550578.3
ncRNA:22   AGUGAUGGCUACCCAAGUGAAC   1
  |==||=|*|||||||||||||*
targets:2293   UUGCUGCGGAUGGGUUCACUUA   2314

3.0 PREDICTED: Glycine max U-box domain-containing protein 34 (LOC100805896), mRNA U-box domain-containing protein 34(LOC100805896) coding protein psRNATarget