ncRNA ID | novel_gma_miR1924 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:8782078-8782228 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451650 |
Length | 22 |
Mature sequence(if miRNA) | 130 - CAAGUGAACCCAUCGGUAGUGA - 151 |
Stem-loop(if miRNA) |
--    UU  CA A          G                UUAAAAAA  UGA   UGA   GUU     UU   U   AUUG  GA  G UUCACUUGGA CUUACCCUCAAGGUCU        AU   GCU   UUU   CUUCU  UGA G   ||||  ||  | |||||||||| ||||||||||||||||        ||   |||   |||   |||||  |||   UGAU  CU  C AAGUGAACCU GAAUGGGAGUUCCAGG        UA   UGA   AAG   GAGGA  AUU U AG    GG  AC C          G                UAGGAUAG  -UG   -UG   -AU     UU   U |
Stem-loop sequence | AUUGUUGACAGAUUCACUUGGAGCUUACCCUCAAGGUCUUUAAAAAAAUUGAGCUUGAUUUGUUCUUCUUUUGAUGUUUUAUUAGGAGUAGAAGUAGUGUAUGAUAGGAUGGACCUUGAGGGUAAGGUCCAAGUGAACCCAUCGGUAGUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014765509.1 |
|
3.0 | PREDICTED: Glycine max U-box domain-containing protein 34-like (LOC100820557), mRNA | U-box domain-containing protein 34-like(LOC100820557) | coding protein | psRNATarget | |||||||||
XM_003550578.3 |
|
3.0 | PREDICTED: Glycine max U-box domain-containing protein 34 (LOC100805896), mRNA | U-box domain-containing protein 34(LOC100805896) | coding protein | psRNATarget |