Search result

BaseInfo

ncRNA ID novel_gma_miR1923
Species Glycine max
Class miRNA
Genome position Chr10:11250017-11250083 [+]
Reference genome Glycine_max_v2.0
Source SRR1294482
Length 24
Mature sequence(if miRNA) 1 - AGAACCUUCUUCCGUGGCUUCCUG - 24
Stem-loop(if miRNA) --                GCU  CU   A   A
  AGAACCUUCUUCCGUG   UC  GCG AAG A
  ||||||||||||||||   ||  ||| ||| C
  UCUUGGAAGAAGGCAC   AG  UGC UUC U
CU                AGU  AG   C   U
Stem-loop sequence AGAACCUUCUUCCGUGGCUUCCUGCGAAAGAACUUCUUCCGUGAGAUGACACGGAAGAAGGUUCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771151.1
ncRNA:24   GUCCUUCGGUGCCUUCUUCCAAGA   1
  |=*|||||*=*|||||||||||||
targets:908   CGAGAAGCAGAGGAAGAAGGUUCU   931

3.0 PREDICTED: Glycine max uncharacterized LOC106797171 (LOC106797171), mRNA uncharacterized LOC106797171(LOC106797171) coding protein psRNATarget