ncRNA ID | novel_gma_miR1922 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:6194277-6194417 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451650;SRR835759 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUAAGUGAUGACGUGACAAACA - 22 |
Stem-loop(if miRNA) |
--               ACAA  AA    C   AU     CACCU    -ACA    UCUCGUUGUCACAUUG   UUAAGUGAUGACGUG    AC  AGUG CAC  CAUUA     UGUC    GGCA                U   |||||||||||||||    ||  |||| |||  |||||     ||||    ||||                C   AAUUCACUACUGCAC    UG  UCAC GUG  GUAGU     ACAG    GUAA                A GC               CAAC  CC    A   CG     -----    GUUA    CUGUGCAAUAACUUCC |
Stem-loop sequence | UUAAGUGAUGACGUGACAAACAAAGUGCCACAUCAUUACACCUUGUCACAGGCAUCUCGUUGUCACAUUGUCACCUUCAAUAACGUGUCAAUGAUUGGACAUGAUGGCGUGACACUCCGUCAACCACGUCAUCACUUAACG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766262.1 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA | uncharacterized LOC100804377(LOC100804377) | coding protein | psRNATarget | |||||||||
XM_003553291.3 |
|
3.0 | PREDICTED: Glycine max mavicyanin-like (LOC100780078), mRNA | mavicyanin-like(LOC100780078) | coding protein | psRNATarget |