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BaseInfo

ncRNA ID novel_gma_miR1922
Species Glycine max
Class miRNA
Genome position Chr20:6194277-6194417 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650;SRR835759
Length 22
Mature sequence(if miRNA) 1 - UUAAGUGAUGACGUGACAAACA - 22
Stem-loop(if miRNA) --               ACAA  AA    C   AU     CACCU    -ACA    UCUCGUUGUCACAUUG
  UUAAGUGAUGACGUG    AC  AGUG CAC  CAUUA     UGUC    GGCA                U
  |||||||||||||||    ||  |||| |||  |||||     ||||    ||||                C
  AAUUCACUACUGCAC    UG  UCAC GUG  GUAGU     ACAG    GUAA                A
GC               CAAC  CC    A   CG     -----    GUUA    CUGUGCAAUAACUUCC
Stem-loop sequence UUAAGUGAUGACGUGACAAACAAAGUGCCACAUCAUUACACCUUGUCACAGGCAUCUCGUUGUCACAUUGUCACCUUCAAUAACGUGUCAAUGAUUGGACAUGAUGGCGUGACACUCCGUCAACCACGUCAUCACUUAACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766262.1
ncRNA:22   ACAAACAGUGCAGUAGUGAAUU   1
  |||||*||||||||||||||||
targets:762   UGUUUAUCACGUCAUCACUUAA   783

1.0 PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA uncharacterized LOC100804377(LOC100804377) coding protein psRNATarget
XM_003553291.3
ncRNA:22   ACAAACAGUGCAGUAGU-GAAUU   1
  |**||||||||||||||-|||||
targets:527   UCAUUGUCACGUCAUCAUCUUAA   549

3.0 PREDICTED: Glycine max mavicyanin-like (LOC100780078), mRNA mavicyanin-like(LOC100780078) coding protein psRNATarget