Search result

BaseInfo

ncRNA ID novel_gma_miR1919
Species Glycine max
Class miRNA
Genome position Chr19:30978607-30978654 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650
Length 21
Mature sequence(if miRNA) 1 - UCCAUAUGAGUCAUACGGAUU - 21
Stem-loop(if miRNA) --   A           C     A
  UCC UAUGAGUCAUA GGAUU A
  ||| ||||||||||| |||||
  AGG AUAUUUAGUAU CUUAA G
UU   C           A     U
Stem-loop sequence UCCAUAUGAGUCAUACGGAUUAAGUAAUUCAUAUGAUUUAUACGGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573065.2
ncRNA:21   UUAGGCAUACUGAGUAUACCU   1
  *||||||||||||||||*|||
targets:3915   CAUCCGUAUGACUCAUACGGA   3935

1.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X2, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
XM_014773439.1
ncRNA:21   UUAGGCAUACUGAGUAUACCU   1
  *||||||||||||||||*|||
targets:3915   CAUCCGUAUGACUCAUACGGA   3935

1.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X3, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
XM_014773434.1
ncRNA:21   UUAGGCAUACUGAGUAUACCU   1
  *||||||||||||||||*|||
targets:3915   CAUCCGUAUGACUCAUACGGA   3935

1.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X1, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget