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BaseInfo

ncRNA ID novel_gma_miR1914
Species Glycine max
Class miRNA
Genome position Chr1:52600385-52600440 [+]
Reference genome Glycine_max_v2.0
Source SRR1451650
Length 22
Mature sequence(if miRNA) 1 - CGGAUUGACAAUCUGUAUGGCC - 22
Stem-loop(if miRNA) --                 --    C  A
  CGGAUUGACAAUCUGUA  UGGC AU C
  |||||||||||||||||  |||| ||
  GCCUAACUGUUAGGCAU  ACCG UA G
AU                 AC    U  G
Stem-loop sequence CGGAUUGACAAUCUGUAUGGCCAUACGGAUUGCCACAUACGGAUUGUCAAUCCGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006594260.2
ncRNA:22   CCGGUAUGUCUAACAGUUAGGC   1
  **||*|=||||||||||||||*
targets:4190   CUCCUUGCAGAUUGUCAAUCCU   4211

3.0 PREDICTED: Glycine max mediator of RNA polymerase II transcription subunit 16-like (LOC100793949), transcript variant X1, mRNA mediator of RNA polymerase II transcription subunit 16-like(LOC100793949) coding protein psRNATarget