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BaseInfo

ncRNA ID	novel_gma_miR1909
Species	Glycine max
Class	miRNA
Genome position	Chr19:37032708-37032770 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451650
Length	22
Mature sequence(if miRNA)	1 - ACACGGACACGUGUCGGACACC - 22
Stem-loop(if miRNA)	--U   -   UUACUUGUCAGUGUCAGUGUCG    GCU GAU                      U    ||| |||    CAG CUG                      G CCA   G   UGCACAGGCACAGACACAGGCU
Stem-loop sequence	UGCUGAUUUACUUGUCAGUGUCAGUGUCGUGUCGGACACAGACACGGACACGUGUCGGACACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006592462.2	ncRNA:22   CCACAGGCUGUGCACAGGCACA   1   |||||||||||||||||||||| targets:815   GGUGUCCGACACGUGUCCGUGU   836 Target Full Sequence	0.0	PREDICTED: Glycine max WD repeat-containing protein 25-like (LOC100816290), transcript variant X2, mRNA	WD repeat-containing protein 25-like(LOC100816290)	coding protein	psRNATarget
XM_014764913.1	ncRNA:22   CCACAGGCUGUGCACAGGCACA   1   |||||||||||||||||||||| targets:754   GGUGUCCGACACGUGUCCGUGU   775 Target Full Sequence	0.0	PREDICTED: Glycine max WD repeat-containing protein 25-like (LOC100816290), transcript variant X3, mRNA	WD repeat-containing protein 25-like(LOC100816290)	coding protein	psRNATarget
XM_006596348.2	ncRNA:22   CCACAGGCUGUGCACAGGCACA   1   |||||=|||||||||||||||| targets:1029   GGUGUUCGACACGUGUCCGUGU   1050 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100806179 (LOC100806179), mRNA	uncharacterized LOC100806179(LOC100806179)	coding protein	psRNATarget
JB171059.1	ncRNA:21   CACAGGCUGUGCACAGGCACA   1   ||||||||||=|||||||||| targets:1   GUGUCCGACAUGUGUCCGUGU   21 Target Full Sequence	1.5	Sequence 8723 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242728.1	ncRNA:21   CACAGGCUGUGCACAGGCACA   1   ||||||||||=|||||||||| targets:1   GUGUCCGACAUGUGUCCGUGU   21 Target Full Sequence	1.5	Sequence 8723 from Patent EP2985353	NA	coding protein	psRNATarget
HI410598.1	ncRNA:21   CACAGGCUGUGCACAGGCACA   1   ||||||||||=|||||||||| targets:1   GUGUCCGACAUGUGUCCGUGU   21 Target Full Sequence	1.5	Sequence 8723 from Patent EP2074227	NA	coding protein	psRNATarget
XM_003553459.3	ncRNA:22   CCACAGGCUGUGCACAGGCACA   1   |||||||||||||*|||||||| targets:3909   GGUGUCCGACACGCGUCCGUGU   3930 Target Full Sequence	1.5	PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At4g08850 (LOC100809137), mRNA	probable LRR receptor-like serine/threonine-protein kinase At4g08850(LOC100809137)	coding protein	psRNATarget
XM_006594204.2	ncRNA:22   CCACAGGCUGUGCACAGGCACA   1   |||||||||||||*|||||||| targets:2279   GGUGUCCGACACGCGUCCGUGU   2300 Target Full Sequence	1.5	PREDICTED: Glycine max histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like (LOC100812749), mRNA	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like(LOC100812749)	coding protein	psRNATarget
XM_003545133.3	ncRNA:22   CCACAGGCUGUGCACAGGCACA   1   |||||||||||||*|||||||| targets:1150   GGUGUCCGACACGCGUCCGUGU   1171 Target Full Sequence	1.5	PREDICTED: Glycine max probable polygalacturonase At3g15720 (LOC100787282), mRNA	probable polygalacturonase At3g15720(LOC100787282)	coding protein	psRNATarget
XM_006607002.2	ncRNA:22   CCACAGGCUGUGCACAGGCACA   1   |||||||||||||||||*|||| targets:1492   GGUGUCCGACACGUGUCGGUGU   1513 Target Full Sequence	1.5	PREDICTED: Glycine max linoleate 9S-lipoxygenase 5, chloroplastic-like (LOC100789019), partial mRNA	linoleate 9S-lipoxygenase 5, chloroplastic-like(LOC100789019)	coding protein	psRNATarget
XM_006589307.2	ncRNA:22   CCACAGGCUGUGCACAGGCACA   1   |||||||||||||*|||||||| targets:634   GGUGUCCGACACGCGUCCGUGU   655 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100791948 (LOC100791948), mRNA	uncharacterized LOC100791948(LOC100791948)	coding protein	psRNATarget
XM_003530731.3	ncRNA:22   CCACAGGCUGUGCACAGGCACA   1   |*||||||||||||||||*||| targets:1953   GAUGUCCGACACGUGUCCAUGU   1974 Target Full Sequence	1.5	PREDICTED: Glycine max beta-(1,2)-xylosyltransferase-like (LOC100816008), mRNA	beta-(1,2)-xylosyltransferase-like(LOC100816008)	coding protein	psRNATarget
XM_014773491.1	ncRNA:22   CCACAGGCUGUGCACAGGCACA   1   |||||||*|||||*|||||||| targets:708   GGUGUCCCACACGCGUCCGUGU   729 Target Full Sequence	2.5	PREDICTED: Glycine max clustered mitochondria protein-like (LOC106798035), mRNA	clustered mitochondria protein-like(LOC106798035)	coding protein	psRNATarget