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BaseInfo

ncRNA ID novel_gma_miR1903
Species Glycine max
Class miRNA
Genome position Chr15:15454527-15454598 [+]
Reference genome Glycine_max_v2.0
Source SRR1294482
Length 24
Mature sequence(if miRNA) 49 - AGGGAAGUUGAGUCUGGAUGUACU - 72
Stem-loop(if miRNA) --  UG   -  A      -     --AGC     AUA
  UG  UCU GA UCGGCU CCCUG     GUCGC   A
  ||  ||| || |||||| |||||     |||||
  AU  AGG CU AGUUGA GGGAC     UAGUG   U
UC  GU   U  G      A     AAAAC     AUG
Stem-loop sequence UGUGUCUGAAUCGGCUCCCUGAGCGUCGCAUAAUGUAGUGAUCAAAACAGGGAAGUUGAGUCUGGAUGUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT093623.1
ncRNA:24   UCAU-GUAGGUCUGAGUUGAAGGGA   1
  ||||-|||||*|||*||||||||||
targets:459   AGUAUCAUCCCGACACAACUUCCCU   483

2.5 Soybean clone JCVI-FLGm-14O21 unknown mRNA NA coding protein psRNATarget
AK286433.1
ncRNA:24   UCAU-GUAGGUCUGAGUUGAAGGGA   1
  ||||-|||||*|||*||||||||||
targets:375   AGUAUCAUCCCGACACAACUUCCCU   399

2.5 Glycine max cDNA, clone: GMFL01-28-F16 NA coding protein psRNATarget
AK243799.1
ncRNA:24   UCAU-GUAGGUCUGAGUUGAAGGGA   1
  ||||-|||||*|||*||||||||||
targets:375   AGUAUCAUCCCGACACAACUUCCCU   399

2.5 Glycine max cDNA, clone: GMFL01-01-E16 NA coding protein psRNATarget
XM_003539638.3
ncRNA:24   UCAU-GUAGGUCUGAGUUGAAGGGA   1
  ||||-|||||*|||*||||||||||
targets:513   AGUAUCAUCCCGACACAACUUCCCU   537

2.5 PREDICTED: Glycine max NAD(P)H-quinone oxidoreductase subunit T, chloroplastic (LOC100819309), mRNA NAD(P)H-quinone oxidoreductase subunit T, chloroplastic(LOC100819309) coding protein psRNATarget
XM_003531783.3
ncRNA:24   UCAU-GUAGGUCUGAGUUGAAGGGA   1
  ||||-|||||*|||*||||||||||
targets:529   AGUAUCAUCCCGACACAACUUCCCU   553

2.5 PREDICTED: Glycine max NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like (LOC100805859), mRNA NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like(LOC100805859) coding protein psRNATarget