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BaseInfo

ncRNA ID	novel_gma_miR1880
Species	Glycine max
Class	miRNA
Genome position	Chr16:21750676-21750763 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451650;SRR1451657;SRR1451662
Length	22
Mature sequence(if miRNA)	1 - UUAACCAAUCUGUAUAACUCAU - 22
Stem-loop(if miRNA)	--        A      A              G          G   GAGUUAUA GGAUUG UUAAUCCGUAUAAU CAUACGGAUU A   |||||||| |||||| |||||||||||||| ||||||||||   CUCAAUAU UCUAAC AAUUAGGUAUAUUG GUAUGCCUAA C UA        G      C              A          U
Stem-loop sequence	GAGUUAUAAGGAUUGAUUAAUCCGUAUAAUGCAUACGGAUUGACUAAUCCGUAUGAGUUAUAUGGAUUAACCAAUCUGUAUAACUCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006583612.2	ncRNA:22   UA-CUCAAUAUGUCUAACCAAUU   1   ||-||||*|||||||||||||*| targets:1310   AUAGAGUGAUACAGAUUGGUUUA   1332 Target Full Sequence	2.5	PREDICTED: Glycine max protein DETOXIFICATION 44, chloroplastic (LOC100797693), transcript variant X4, mRNA	protein DETOXIFICATION 44, chloroplastic(LOC100797693)	coding protein	psRNATarget
XM_014778028.1	ncRNA:22   UA-CUCAAUAUGUCUAACCAAUU   1   ||-||||*|||||||||||||*| targets:1136   AUAGAGUGAUACAGAUUGGUUUA   1158 Target Full Sequence	2.5	PREDICTED: Glycine max protein DETOXIFICATION 44, chloroplastic (LOC100797693), transcript variant X5, mRNA	protein DETOXIFICATION 44, chloroplastic(LOC100797693)	coding protein	psRNATarget
XM_006583611.2	ncRNA:22   UA-CUCAAUAUGUCUAACCAAUU   1   ||-||||*|||||||||||||*| targets:1161   AUAGAGUGAUACAGAUUGGUUUA   1183 Target Full Sequence	2.5	PREDICTED: Glycine max protein DETOXIFICATION 44, chloroplastic (LOC100797693), transcript variant X3, mRNA	protein DETOXIFICATION 44, chloroplastic(LOC100797693)	coding protein	psRNATarget
XM_006583609.2	ncRNA:22   UA-CUCAAUAUGUCUAACCAAUU   1   ||-||||*|||||||||||||*| targets:1307   AUAGAGUGAUACAGAUUGGUUUA   1329 Target Full Sequence	2.5	PREDICTED: Glycine max protein DETOXIFICATION 44, chloroplastic (LOC100797693), transcript variant X1, mRNA	protein DETOXIFICATION 44, chloroplastic(LOC100797693)	coding protein	psRNATarget
XM_006583610.2	ncRNA:22   UA-CUCAAUAUGUCUAACCAAUU   1   ||-||||*|||||||||||||*| targets:1308   AUAGAGUGAUACAGAUUGGUUUA   1330 Target Full Sequence	2.5	PREDICTED: Glycine max protein DETOXIFICATION 44, chloroplastic (LOC100797693), transcript variant X2, mRNA	protein DETOXIFICATION 44, chloroplastic(LOC100797693)	coding protein	psRNATarget