ncRNA ID | novel_gma_miR1878 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:32971382-32971448 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451650 |
Length | 24 |
Mature sequence(if miRNA) | 44 - AACAAAGAUUAUAUUAGGUGAUUU - 67 |
Stem-loop(if miRNA) |
--                  U           A   AACAAAGAUUAUAUUAGG GAUUUGUGCUC A   |||||||||||||||||| ||||||||||| U   UUGUUUCUAAUAUAAUCC CUAAACACGAG U AA                  U           U |
Stem-loop sequence | AACAAAGAUUAUAUUAGGUGAUUUGUGCUCAAUUUGAGCACAAAUCUCCUAAUAUAAUCUUUGUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006591280.2 |
|
2.5 | PREDICTED: Glycine max anaphase-promoting complex subunit 2-like (LOC100785428), transcript variant X2, mRNA | anaphase-promoting complex subunit 2-like(LOC100785428) | coding protein | psRNATarget | |||||||||
XM_006591279.2 |
|
2.5 | PREDICTED: Glycine max anaphase-promoting complex subunit 2-like (LOC100785428), transcript variant X1, mRNA | anaphase-promoting complex subunit 2-like(LOC100785428) | coding protein | psRNATarget |