ncRNA ID | novel_gma_miR1876 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:25910912-25910971 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294482;SRR1294484;SRR1294485;SRR1295517;SRR1295520;SRR1295521;SRR1295525;SRR1295526;SRR1295530;SRR1292927;SRR1292928;SRR1451608;SRR1292929;SRR1451611;SRR1294476;SRR1294477 |
Length | 22 |
Mature sequence(if miRNA) | 1 - GGAGGAAGAAUCUGGAAGGCCU - 22 |
Stem-loop(if miRNA) |
--  GAG       G             - A   GC   CCAGGUU CUUCCUCCAGAAG C A   ||   ||||||| ||||||||||||| |   CG   GGUCUAA GAAGGAGGUCUUC G C UC  GAA       -             C C |
Stem-loop sequence | GCGAGCCAGGUUGCUUCCUCCAGAAGCAACCGCCUUCUGGAGGAAGAAUCUGGAAGGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767180.1 |
|
2.0 | PREDICTED: Glycine max probable pre-mRNA-splicing factor ATP-dependent RNA helicase (LOC100790809), transcript variant X4, mRNA | probable pre-mRNA-splicing factor ATP-dependent RNA helicase(LOC100790809) | coding protein | psRNATarget |